RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CALM3P0DP25 149 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 STX2P32856 288 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ZAP70P43403 619 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 CD97P48960 835 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 CLCN2P51788 898 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 HPCAP84074 193 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ADRM1Q16186 407 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 RGS9BPQ6ZS82 235 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 DAAM2Q86T65 1068 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 NIM1KQ8IY84 436 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 TPCN2Q8NHX9 752 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 TTC8Q8TAM2 541 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ZNF398Q8TD17 642 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 ERP27Q96DN0 273 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 HES6Q96HZ4 224 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 CLMNQ96JQ2 1002 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 RTFDC1Q9BY42 306 aaPredicted RBP9.7□□□□□ -0.86
HPS4-217ENST00000496385 BRD8Q9H0E9 1235 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 TMEM60Q9H2L4 133 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 RNF41Q9H4P4 317 aaPredicted RBP9.7□□□□□ -0.86
HPS4-217ENST00000496385 TIMMDC1Q9NPL8 285 aa9.7□□□□□ -0.86
HPS4-217ENST00000496385 A0A087X0T9 212 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 H0Y3Z8 333 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 KIAA0391O15091 583 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 CCDC22O60826 627 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ENTPD5O75356 428 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 FAM228BP0C875 321 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 VAV1P15498 845 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 UBA7P41226 1012 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RPL26P61254 145 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 KLHL30Q0D2K2 578 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 SF3A3Q12874 501 aaKnown RBP eCLIP9.69□□□□□ -0.869e-7■■■■□ 22
HPS4-217ENST00000496385 PUM3Q15397 648 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 CGB2Q6NT52 195 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ZDHHC24Q6UX98 284 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 SEPT14Q6ZU15 432 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 HS2ST1Q7LGA3 356 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 AK8Q96MA6 479 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 UNC45AQ9H3U1 944 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 HSFX1Q9UBD0 423 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ANGPTL2Q9UKU9 493 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 TMED5Q9Y3A6 229 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ATAD5Q96QE3 1844 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 HNRNPRO43390 633 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 DDNO94850 711 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 T-ENOLP0DO92 83 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ITGA4P13612 1032 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 EPHB2P29323 1055 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RAB15P59190 212 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 IL9RQ01113 521 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 FUT2Q10981 343 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 CYLC2Q14093 348 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 NPY5RQ15761 445 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 KHDC1Q4VXA5 237 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 SLC45A4Q5BKX6 768 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 GALNT17Q6IS24 598 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 NCCRP1Q6ZVX7 275 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 SPATA24Q86W54 205 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 GUF1Q8N442 669 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 CTNNBL1Q8WYA6 563 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 STRBPQ96SI9 672 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 EYA3Q99504 573 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 TRIM9Q9C026 710 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 KIAA1683Q9H0B3 1180 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RIC8AQ9NPQ8 531 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 TRPV5Q9NQA5 729 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 NKIRAS1Q9NYS0 192 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 LTBP3Q9NS15 1303 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 A0A0J9YVX5 310 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 PSMG1O95456 288 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 CYP1A1P04798 512 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 TROVE2P10155 538 aaKnown RBP eCLIP9.69□□□□□ -0.86
HPS4-217ENST00000496385 SMARCA1P28370 1054 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ACADVLP49748 655 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 PLTPP55058 493 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RTP1P59025 263 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 STK4Q13043 487 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RCN1Q15293 331 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 ASIC2Q16515 512 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 RINLQ6ZS11 566 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 EPS8L3Q8TE67 593 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 STMN2Q93045 179 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 DGCR14Q96DF8 476 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 FAM84BQ96KN1 310 aaPredicted RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 TUBGCP5Q96RT8 1024 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 CELF4Q9BZC1 486 aaKnown RBP9.69□□□□□ -0.86
HPS4-217ENST00000496385 NAPBQ9H115 298 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 PRDM16Q9HAZ2 1276 aa9.69□□□□□ -0.86
HPS4-217ENST00000496385 TUBA8Q9NY65 449 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms