RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SKIP12755 728 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 PHKA2P46019 1235 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 FZD5Q13467 585 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 LONRF3Q496Y0 759 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 HEATR6Q6AI08 1181 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 GRASPQ7Z6J2 395 aaPredicted RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 METTL3Q86U44 580 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 PALB2Q86YC2 1186 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 FGF13Q92913 245 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 LPPQ93052 612 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 CHMP4BQ9H444 224 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 JADE2Q9NQC1 790 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 MAD2L2Q9UI95 211 aa10.89□□□□□ -0.67
SMARCAL1-213ENST00000496037 B4E1Z4 1266 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 PIK3CDO00329 1044 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZNF213O14771 459 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 TOP3BO95985 862 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 C1RP00736 705 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 ALDH2P05091 517 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 TMOD1P28289 359 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 SH3PXD2AQ5TCZ1 1133 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 TWF2Q6IBS0 349 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 PI4K2BQ8TCG2 481 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 DNASE1L2Q92874 299 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 LOXL4Q96JB6 756 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 TMEM175Q9BSA9 504 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 EDEM2Q9BV94 578 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 RIOX1Q9H6W3 641 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 LMAN1LQ9HAT1 526 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 FAN1Q9Y2M0 1017 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 NEUROG3Q9Y4Z2 214 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 UBIAD1Q9Y5Z9 338 aa10.88□□□□□ -0.67
SMARCAL1-213ENST00000496037 NFASCO94856 1347 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 IGSF10Q6WRI0 2623 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 TGM5O43548 720 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 EPN2O95208 641 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 TCF3P15923 654 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 ABL2P42684 1182 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 CLCN3P51790 818 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 MCMDC2Q4G0Z9 681 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 PDXDC2PQ6P474 469 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZNF280BQ86YH2 543 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 PIBF1Q8WXW3 757 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 RXFP1Q9HBX9 757 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 POLIQ9UNA4 740 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 CEP131Q9UPN4 1083 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 GPSM3Q9Y4H4 160 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 GREB1Q4ZG55 1949 aa10.87□□□□□ -0.67
SMARCAL1-213ENST00000496037 SPDYE3A6NKU9 549 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZBTB42B2RXF5 422 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 MEIS2O14770 477 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 ECI2O75521 394 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 OFD1O75665 1012 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 FGFR4P22455 802 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 KIF5BP33176 963 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 MPLP40238 635 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 RAB27AP51159 221 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 NTHL1P78549 312 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 KIAA1211LQ6NV74 962 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 PROSER1Q86XN7 944 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 GLYCTKQ8IVS8 523 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 FAM3CQ92520 227 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 ZNF302Q9NR11 478 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 CHST12Q9NRB3 414 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 VPS45Q9NRW7 570 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 KCNH7Q9NS40 1196 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 PRG3Q9Y2Y8 225 aaPredicted RBP10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 PCDHGA5Q9Y5G8 931 aa10.86□□□□□ -0.67
SMARCAL1-213ENST00000496037 A0A0D9SFI3 127 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 C4orf47A7E2U8 309 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 NRP1O14786 923 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 MAGEB2O15479 319 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 CYTH3O43739 400 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 B4GALT3O60512 393 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 XYLBO75191 536 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 CEACAM1P13688 526 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 DSG1Q02413 1049 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 CREMQ03060 361 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 GRM4Q14833 912 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 COL28A1Q2UY09 1125 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 TRMT1LQ7Z2T5 733 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 CACNA2D4Q7Z3S7 1137 aa10.85□□□□□ -0.67
SMARCAL1-213ENST00000496037 CCDC60Q8IWA6 550 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms