RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
TRIM59-206ENST00000494486 HELLSQ9NRZ9 838 aa12.4□□□□□ -0.42
TRIM59-206ENST00000494486 C2orf42Q9NWW7 574 aa12.4□□□□□ -0.42
TRIM59-206ENST00000494486 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
TRIM59-206ENST00000494486 RAXQ9Y2V3 346 aa12.4□□□□□ -0.42
TRIM59-206ENST00000494486 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 MAP3K13O43283 966 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 NR1I2O75469 434 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 PSMC3P17980 439 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 RPL17P18621 184 aaKnown RBP12.39□□□□□ -0.43
TRIM59-206ENST00000494486 ATP4AP20648 1035 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 GDI1P31150 447 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF423Q2M1K9 1284 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 UVSSAQ2YD98 709 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 NLRP7Q8WX94 980 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF668Q96K58 619 aaPredicted RBP12.39□□□□□ -0.43
TRIM59-206ENST00000494486 COLEC11Q9BWP8 271 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 APOL6Q9BWW8 343 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 GCOM2Q9BZD3 368 aaPredicted RBP12.39□□□□□ -0.43
TRIM59-206ENST00000494486 CLMPQ9H6B4 373 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 RSAD1Q9HA92 442 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
TRIM59-206ENST00000494486 TTC41PQ6P2S7 1318 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 CNTNAP2Q9UHC6 1331 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 CAPN8A6NHC0 703 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF263O14978 683 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 CYTH3O43739 400 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 POMCP01189 267 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 FCARP24071 287 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 HOXC13P31276 330 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 PXNP49023 591 aaPredicted RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 SWSAP1Q6NVH7 229 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 MIS18BP1Q6P0N0 1132 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 RTL10Q7L3V2 364 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 MRPL10Q7Z7H8 261 aaKnown RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF843Q8N446 348 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 MXRA8Q9BRK3 442 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 AVENQ9NQS1 362 aaPredicted RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 HCFC1R1Q9NWW0 138 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
TRIM59-206ENST00000494486 PCDHB2Q9Y5E7 798 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 F5P12259 2224 aa12.38□□□□□ -0.43
TRIM59-206ENST00000494486 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 UPK3BL1B0FP48 263 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 UPK3BL2E5RIL1 263 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF213O14771 459 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 EXTL3O43909 919 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 CSDE1O75534 798 aaKnown RBP12.37□□□□□ -0.43
TRIM59-206ENST00000494486 PDXDC1Q6P996 788 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 PIP4P1Q86T03 277 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 LRRC71Q8N4P6 559 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 DEPDC1BQ8WUY9 529 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 B3GALT6Q96L58 329 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 INO80BQ9C086 356 aaPredicted RBP12.37□□□□□ -0.43
TRIM59-206ENST00000494486 ZBTB40Q9NUA8 1239 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
TRIM59-206ENST00000494486 B4E1Z4 1266 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 CCNE2O96020 404 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 NTRK1P04629 796 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 KIF5BP33176 963 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 LMAN2Q12907 356 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
TRIM59-206ENST00000494486 KARSQ15046 597 aaKnown RBP12.36□□□□□ -0.43
TRIM59-206ENST00000494486 MCMDC2Q4G0Z9 681 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 FAM78AQ5JUQ0 283 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 FUT10Q6P4F1 479 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
TRIM59-206ENST00000494486 TMEFF1Q8IYR6 380 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 CAMKK1Q8N5S9 505 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 AGO4Q9HCK5 861 aaKnown RBP12.36□□□□□ -0.43
TRIM59-206ENST00000494486 UBN1Q9NPG3 1134 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 SLC8A2Q9UPR5 921 aa12.36□□□□□ -0.43
TRIM59-206ENST00000494486 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
TRIM59-206ENST00000494486 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 MTCL1Q9Y4B5 1905 aaKnown RBP12.35□□□□□ -0.43
TRIM59-206ENST00000494486 SPDYE3A6NKU9 549 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 ZNF862O60290 1169 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 ATG13O75143 517 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 RHOP08100 348 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 KPNA1P52294 538 aaPredicted RBP12.35□□□□□ -0.43
TRIM59-206ENST00000494486 IRX4P78413 519 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 SRSF1Q07955 248 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRIM59-206ENST00000494486 DSC1Q08554 894 aa12.35□□□□□ -0.43
TRIM59-206ENST00000494486 HNRNPDQ14103 355 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms