RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SNRPFP62306 86 aaKnown RBP15.91■□□□□ 0.14
BRCA1-223ENST00000494123 FAM189BP81408 668 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 MCL1Q07820 350 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 COBLL1Q53SF7 1204 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 ARMCX5Q6P1M9 558 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 NPAS4Q8IUM7 802 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 ADSSL1Q8N142 457 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 TMEM161AQ9NX61 479 aa15.91■□□□□ 0.14
BRCA1-223ENST00000494123 CGNQ9P2M7 1197 aaKnown RBP15.91■□□□□ 0.14
BRCA1-223ENST00000494123 PDXKO00764 312 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ABLIM1O14639 778 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 CALUO43852 315 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ZNF623O75123 536 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 LETM1O95202 739 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 EOMESO95936 686 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ITGA4P13612 1032 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 BMP6P22004 513 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 GARTP22102 1010 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 NLRP12P59046 1061 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 OSTNP61366 133 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 KLHL10Q6JEL2 608 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 FAM117BQ6P1L5 589 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 THNSL1Q8IYQ7 743 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 TDHQ8IZJ6 230 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 SMG8Q8ND04 991 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 NOC3LQ8WTT2 800 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 CCDC94Q9BW85 323 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 KCTD10Q9H3F6 313 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 NXF3Q9H4D5 531 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ELAC1Q9H777 363 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 AGPAT3Q9NRZ7 376 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 AGO2Q9UKV8 859 aaKnown RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 HES2Q9Y543 173 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 STYXL1Q9Y6J8 313 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 TTC3P53804 2025 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 A0A0B4J269 797 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 CLIC2O15247 247 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 TGFB1I1O43294 461 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 KYAT1Q16773 422 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 RASIP1Q5U651 963 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 MLKLQ8NB16 471 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 PHOSPHO2Q8TCD6 241 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 LPPQ93052 612 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 TOP1MTQ969P6 601 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
BRCA1-223ENST00000494123 TSG101Q99816 390 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 CBWD1Q9BRT8 395 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 ZBED2Q9BTP6 218 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 HAPLN2Q9GZV7 340 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 PCIF1Q9H4Z3 704 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 DACH1Q9UI36 760 aa15.9■□□□□ 0.14
BRCA1-223ENST00000494123 PTPRSQ13332 1948 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 OGTO15294 1046 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 HOXA2O43364 376 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
BRCA1-223ENST00000494123 ADSSP30520 456 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 GRM5P41594 1212 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 YARSP54577 528 aaKnown RBP15.89■□□□□ 0.13
BRCA1-223ENST00000494123 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
BRCA1-223ENST00000494123 MRPL10Q7Z7H8 261 aaKnown RBP15.89■□□□□ 0.13
BRCA1-223ENST00000494123 ABI1Q8IZP0 508 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 UBN1Q9NPG3 1134 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 SNTG2Q9NY99 539 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 CTNND2Q9UQB3 1225 aa15.89■□□□□ 0.13
BRCA1-223ENST00000494123 PPP1R3GB7ZBB8 358 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 KIAA0391O15091 583 aaKnown RBP15.88■□□□□ 0.13
BRCA1-223ENST00000494123 LDHAP00338 332 aaKnown RBP15.88■□□□□ 0.13
BRCA1-223ENST00000494123 ATF7P17544 494 aaPredicted RBP15.88■□□□□ 0.13
BRCA1-223ENST00000494123 AKAP5P24588 427 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 CYP2J2P51589 502 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 DPCR1Q3MIW9 517 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 SEZ6Q53EL9 994 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 PRPF38BQ5VTL8 546 aaKnown RBP15.88■□□□□ 0.13
BRCA1-223ENST00000494123 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
BRCA1-223ENST00000494123 CEP120Q8N960 986 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 P2RX5Q93086 422 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 SAAL1Q96ER3 474 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 ACAP3Q96P50 834 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 RSAD1Q9HA92 442 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 HSPBP1Q9NZL4 362 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 TRAF3IP3Q9Y228 551 aa15.88■□□□□ 0.13
BRCA1-223ENST00000494123 BICDL2A1A5D9 508 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 SYCE3A1L190 88 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 NR3C1P04150 777 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 CLTAP09496 248 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 FGFR1P11362 822 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 CCNE1P24864 410 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 PAK1Q13153 545 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 HSP90AA2PQ14568 343 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-223ENST00000494123 STX1AQ16623 288 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 CENPPQ6IPU0 288 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 GLB1LQ6UWU2 654 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 AGMOQ6ZNB7 445 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 HERC6Q8IVU3 1022 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 GPD1LQ8N335 351 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms