RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 FAM102BQ5T8I3 360 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 LRRC69Q6ZNQ3 347 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 RBM23Q86U06 439 aaKnown RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 FAM228AQ86W67 206 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 FAM177A1Q8N128 213 aaPredicted RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 BEND7Q8N7W2 519 aaPredicted RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 RNF169Q8NCN4 708 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 TMEM40Q8WWA1 233 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 SLC5A5Q92911 643 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 LENG9Q96B70 501 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 ZNF668Q96K58 619 aaPredicted RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 POP1Q99575 1024 aaKnown RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 LRFN3Q9BTN0 628 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 UNC45AQ9H3U1 944 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 ELAC1Q9H777 363 aaKnown RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 TLE6Q9H808 572 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 RC3H2Q9HBD1 1191 aaKnown RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 TYW1Q9NV66 732 aaKnown RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 TMEM161AQ9NX61 479 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 HCN4Q9Y3Q4 1203 aa8.47□□□□□ -1.05
RBM39-238ENST00000493853 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
RBM39-238ENST00000493853 C9IYK1 514 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 PI4K2BG5E9Z4 385 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 ZNF862O60290 1169 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 MGEA5O60502 916 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 DKC1O60832 514 aaKnown RBP eCLIP8.46□□□□□ -1.06
RBM39-238ENST00000493853 PSMD10O75832 226 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 FGF18O76093 207 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 DKK1O94907 266 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 LINC00271P0C7V0 271 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 FAM157BP0CG42 384 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 NRIP1P48552 1158 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 FAM189BP81408 668 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 KRT17Q04695 432 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 UBE3AQ05086 875 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 ADAM15Q13444 863 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 INF2Q27J81 1249 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 LETM2Q2VYF4 491 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 MTERF2Q49AM1 385 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 KANK3Q6NY19 840 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 ADHFE1Q8IWW8 467 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 GJA10Q969M2 543 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 FAM122AQ96E09 287 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 JPH2Q9BR39 696 aaPredicted RBP8.46□□□□□ -1.06
RBM39-238ENST00000493853 GCOM2Q9BZD3 368 aaPredicted RBP8.46□□□□□ -1.06
RBM39-238ENST00000493853 INO80BQ9C086 356 aaPredicted RBP8.46□□□□□ -1.06
RBM39-238ENST00000493853 TMEM117Q9H0C3 514 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 BRMS1Q9HCU9 246 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 CD320Q9NPF0 282 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 DDX25Q9UHL0 483 aaKnown RBP8.46□□□□□ -1.06
RBM39-238ENST00000493853 RAPGEFL1Q9UHV5 662 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 CD207Q9UJ71 328 aa8.46□□□□□ -1.06
RBM39-238ENST00000493853 TTC28Q96AY4 2481 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 TRANK1O15050 2925 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 XIRP2A4UGR9 3374 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 CYP3A7-CYP3A51PA0A087WV96 503 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 FSD2A1L4K1 749 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 FAM86C2PA6NEL3 165 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 BAG4O95429 457 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 TDP2O95551 362 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 SRGAP2BP0DMP2 458 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 FGFR1P11362 822 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 DARSP14868 501 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 LAG3P18627 525 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 CYP3A7P24462 503 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 CA8P35219 290 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 GTF2F1P35269 517 aaKnown RBP eCLIP8.45□□□□□ -1.06
RBM39-238ENST00000493853 LTBRP36941 435 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 BMS1Q14692 1282 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 COL19A1Q14993 1142 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 ANKRD1Q15327 319 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 CRTC2Q53ET0 693 aaPredicted RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 MOXD1Q6UVY6 613 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 C1orf229Q6ZS94 237 aaPredicted RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 EXOC8Q8IYI6 725 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 COLGALT1Q8NBJ5 622 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 TMEM87AQ8NBN3 555 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 DAGLBQ8NCG7 672 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 WASF1Q92558 559 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 FAM20AQ96MK3 541 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 NAP1L4Q99733 375 aaKnown RBP8.45□□□□□ -1.06
RBM39-238ENST00000493853 ADAMTS10Q9H324 1103 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 ENTPD7Q9NQZ7 604 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 TLR9Q9NR96 1032 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 DACT1Q9NYF0 836 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 KCNJ14Q9UNX9 436 aa8.45□□□□□ -1.06
RBM39-238ENST00000493853 SPTBN5Q9NRC6 3674 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 SHISA8B8ZZ34 492 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 PER2O15055 1255 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms