RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
PRPF3-206ENST00000493553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.97□□□□□ -0.65
PRPF3-206ENST00000493553 HOMER2Q9NSB8 354 aa10.97□□□□□ -0.65
PRPF3-206ENST00000493553 FBXL5Q9UKA1 691 aa10.97□□□□□ -0.65
PRPF3-206ENST00000493553 ZNF214Q9UL59 606 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-206ENST00000493553 SIK3Q9Y2K2 1263 aa10.97□□□□□ -0.65
PRPF3-206ENST00000493553 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
PRPF3-206ENST00000493553 ASTN2O75129 1339 aaPredicted RBP10.97□□□□□ -0.65
PRPF3-206ENST00000493553 CTAGE9A4FU28 777 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 SOWAHDA6NJG2 315 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 MAPK13O15264 365 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 N4BP1O75113 896 aaKnown RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 COBLO75128 1261 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 AFPP02771 609 aaKnown RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 NR3C1P04150 777 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 TUBBP07437 444 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 MYCLP12524 364 aaPredicted RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 UBXN2AP68543 259 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 IRX3P78415 501 aaPredicted RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 MRPS9P82933 396 aaKnown RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 ENPEPQ07075 957 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 STXBP2Q15833 593 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 SLC9C1Q4G0N8 1177 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 TRIM65Q6PJ69 517 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 RAD9BQ6WBX8 426 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 TOGARAM2Q6ZUX3 1019 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 ZNF720Q7Z2F6 126 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 PNMA8AQ86V59 439 aaPredicted RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 ALYREFQ86V81 257 aaKnown RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 VPS36Q86VN1 386 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 NELFCDQ8IXH7 590 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 C12orf56Q8IXR9 622 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 EXOC8Q8IYI6 725 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 MNS1Q8NEH6 495 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 MCPH1Q8NEM0 835 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 HPS3Q969F9 1004 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 ACCSQ96QU6 501 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 CYP39A1Q9NYL5 469 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 COL20A1Q9P218 1284 aa10.96□□□□□ -0.65
PRPF3-206ENST00000493553 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.96□□□□□ -0.65
PRPF3-206ENST00000493553 DICER1Q9UPY3 1922 aaKnown RBP10.96□□□□□ -0.66
PRPF3-206ENST00000493553 ATAD5Q96QE3 1844 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 NPHP3-ACAD11A0A0J9YXS1 232 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 GNB5O14775 395 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 P4HA2O15460 535 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 GFPT2O94808 682 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 TGFB3P10600 412 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 PLS3P13797 630 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 ALAS2P22557 587 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 YWHABP31946 246 aaKnown RBP10.95□□□□□ -0.66
PRPF3-206ENST00000493553 ICAM3P32942 547 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 RTP1P59025 263 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 KIF5AQ12840 1032 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 PPIL2Q13356 520 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 VGLL4Q14135 290 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 OCLNQ16625 522 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 SLC30A10Q6XR72 485 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 GBP6Q6ZN66 633 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 KIAA1328Q86T90 577 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 SYCP3Q8IZU3 236 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 PIGOQ8TEQ8 1089 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 DEF6Q9H4E7 631 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 KLK14Q9P0G3 267 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 LOXHD1Q8IVV2 1947 aa10.95□□□□□ -0.66
PRPF3-206ENST00000493553 A0A0G2JLL6 359 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 RRP9O43818 475 aaKnown RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 GRIN3BO60391 1043 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 HIP1RO75146 1068 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 URI1O94763 535 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 LCA5LO95447 670 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 SERPING1P05155 500 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 KRT13P13646 458 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 RARRES1P49788 294 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 GOLGA8FQ08AF8 430 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 RAD51AP2Q09MP3 1159 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 GOLGA8DPQ0D2H9 430 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 ITGB3BPQ13352 177 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 DGKZQ13574 1117 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 PLS1Q14651 629 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 TMEM132BQ14DG7 1078 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 XKR3Q5GH77 459 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 SFMBT2Q5VUG0 894 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 C9orf131Q5VYM1 1079 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 PDXDC1Q6P996 788 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 PRRT2Q7Z6L0 340 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 FAM186BQ8IYM0 893 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 ANKRD35Q8N283 1001 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 CEP112Q8N8E3 955 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 IL31RAQ8NI17 732 aa10.94□□□□□ -0.66
PRPF3-206ENST00000493553 NAPGQ99747 312 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 JPH1Q9HDC5 661 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms