RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 CLTBP09497 229 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TTLL12Q14166 644 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 ASIC2Q16515 512 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 KIAA0753Q2KHM9 967 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 BEND6Q5SZJ8 279 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 NSMFQ6X4W1 530 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 C1orf186Q6ZWK4 172 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 EPM2AIP1Q7L775 607 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 BMP8AQ7Z5Y6 402 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 AFAP1L1Q8TED9 768 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 SLC5A5Q92911 643 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TSGA10Q9BZW7 698 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 GOLPH3Q9H4A6 298 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 PARVGQ9HBI0 331 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.62□□□□□ -1.193e-11■■■■□ 20.8
HERC4-211ENST00000492996 TYW1Q9NV66 732 aaKnown RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 PACSIN2Q9UNF0 486 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 COG5Q9UP83 839 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TRAF3IP3Q9Y228 551 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 CTDP1Q9Y5B0 961 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 TSC2P49815 1807 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 DOCK3Q8IZD9 2030 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 NUP210Q8TEM1 1887 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 A0A1W2PQ45 241 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 A0A1W2PQY0 241 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 ARHGEF35A5YM69 484 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 PHACTR2O75167 634 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 SERPING1P05155 500 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TRIM49P0CI25 452 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TRIM49CP0CI26 452 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 EPB41P11171 864 aaKnown RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 PRKAR2AP13861 404 aaKnown RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 RTP1P59025 263 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 MGAT3Q09327 533 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 FAAP100Q0VG06 881 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 SPP2Q13103 211 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 PTK7Q13308 1070 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 CBX2Q14781 532 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 MTFR1Q15390 333 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 SKIDA1Q1XH10 827 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 ASTE1Q2TB18 679 aaPredicted RBP7.62□□□□□ -1.19
HERC4-211ENST00000492996 MUM1L1Q5H9M0 696 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 MIER3Q7Z3K6 550 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 SRLQ86TD4 932 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 ALS2CR12Q96Q35 445 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 TEKT3Q9BXF9 490 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 EHMT1Q9H9B1 1298 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 PDE11AQ9HCR9 933 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 KCNH7Q9NS40 1196 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 RWDD3Q9Y3V2 267 aa7.62□□□□□ -1.19
HERC4-211ENST00000492996 PLXNA4Q9HCM2 1894 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 TISP43B9A030 160 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 SORBS3O60504 671 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 LINC00271P0C7V0 271 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 UCHL3P15374 230 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 RPL13P26373 211 aaKnown RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 KLRC1P26715 233 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 PON1P27169 355 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 ADORA2AP29274 412 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 HMGCS2P54868 508 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 SOX10P56693 466 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 CCDC181Q5TID7 509 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 PDE12Q6L8Q7 609 aaKnown RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 PACS2Q86VP3 889 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 KCTD17Q8N5Z5 321 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 SLC35C1Q96A29 364 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 MS4A14Q96JA4 679 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 NACC1Q96RE7 527 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 GANQ9H2C0 597 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 PCIF1Q9H4Z3 704 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 ZNF408Q9H9D4 720 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 TUFT1Q9NNX1 390 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 GCNT4Q9P109 453 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 AJAP1Q9UKB5 411 aaPredicted RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 SNX12Q9UMY4 172 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 ANKRD65E5RJM6 399 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 H3BQF6 201 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 N4BP1O75113 896 aaKnown RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 SP4Q02446 784 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 PTK2Q05397 1052 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 PPP2R5CQ13362 524 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 KCTD19Q17RG1 926 aaPredicted RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 FRMD5Q7Z6J6 570 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 FAM186BQ8IYM0 893 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 LINC01465Q8N7H1 131 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 NOX5Q96PH1 765 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 TAAR1Q96RJ0 339 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 OSBPL9Q96SU4 736 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 MMP19Q99542 508 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 MPHOSPH6Q99547 160 aaKnown RBP7.61□□□□□ -1.19
HERC4-211ENST00000492996 MXRA8Q9BRK3 442 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 EDEM3Q9BZQ6 932 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 CYP39A1Q9NYL5 469 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 RAB21Q9UL25 225 aa7.61□□□□□ -1.19
HERC4-211ENST00000492996 SSU72P8A0A1W2PR75 194 aa7.6□□□□□ -1.19
HERC4-211ENST00000492996 ANO9A1A5B4 782 aa7.6□□□□□ -1.19
HERC4-211ENST00000492996 FSCN2O14926 492 aa7.6□□□□□ -1.19
HERC4-211ENST00000492996 HIP1RO75146 1068 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms