RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 PRMT7Q9NVM4 692 aaPredicted RBP10.77□□□□□ -0.69
TMEM39A-210ENST00000490099 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
TMEM39A-210ENST00000490099 FAN1Q9Y2M0 1017 aa10.77□□□□□ -0.69
TMEM39A-210ENST00000490099 HES2Q9Y543 173 aa10.77□□□□□ -0.69
TMEM39A-210ENST00000490099 C5orf42Q9H799 3197 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 FAM86C2PA6NEL3 165 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 ACKR2O00590 384 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 ST18O60284 1047 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 NAMPTP43490 491 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 MCM2P49736 904 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 ITIH3Q06033 890 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 HYIQ5T013 277 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 HAUS3Q68CZ6 603 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 BMP8AQ7Z5Y6 402 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 KCTD17Q8N5Z5 321 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 AUTS2Q8WXX7 1259 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 EDAQ92838 391 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 TBC1D32Q96NH3 1257 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 NTPCRQ9BSD7 190 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 MMTAG2Q9BU76 263 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 C2orf40Q9H1Z8 148 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 NXF3Q9H4D5 531 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 RXFP1Q9HBX9 757 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 LRWD1Q9UFC0 647 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 MUTYHQ9UIF7 546 aa10.76□□□□□ -0.69
TMEM39A-210ENST00000490099 MUC6Q6W4X9 2439 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 ARHGEF35A5YM69 484 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 LRRIQ4A6NIV6 560 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 SOD2P04179 222 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 EDN1P05305 212 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 MLH1P40692 756 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 EFNA5P52803 228 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 PPP2R5AQ15172 486 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 MAPK6Q16659 721 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 MAEAQ7L5Y9 396 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 TAS1R1Q7RTX1 841 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 PPFIBP1Q86W92 1011 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 HACE1Q8IYU2 909 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 DAW1Q8N136 415 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 KIFAP3Q92845 792 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 KLHL5Q96PQ7 755 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 RPS6KC1Q96S38 1066 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 RHOBTB2Q9BYZ6 727 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 BHMT2Q9H2M3 363 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 PDZD7Q9H5P4 517 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 DZANK1Q9NVP4 752 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 KIAA1024Q9UPX6 916 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 KIF3AQ9Y496 699 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 ZNF318Q5VUA4 2279 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 PIEZO1Q92508 2521 aa10.75□□□□□ -0.69
TMEM39A-210ENST00000490099 TRIOO75962 3097 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 PTGESO14684 152 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 N4BP3O15049 544 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 EPCAMP16422 314 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 AKAP5P24588 427 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 SCNN1GP51170 649 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 ATP2C1P98194 919 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 DSG1Q02413 1049 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 MAPK7Q13164 816 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 NAB2Q15742 525 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 NT5DC1Q5TFE4 455 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 C1orf186Q6ZWK4 172 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 CDR2LQ86X02 465 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 ZBTB8OSQ8IWT0 167 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 KCNN1Q92952 543 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 CCDC43Q96MW1 224 aaKnown RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 FAM193BQ96PV7 902 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 HERC2P3Q9BVR0 1158 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 COLEC11Q9BWP8 271 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 C17orf75Q9HAS0 396 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 PTPRHQ9HD43 1115 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 DDX19AQ9NUU7 478 aaKnown RBP10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 ZDBF2Q9HCK1 2354 aa10.74□□□□□ -0.69
TMEM39A-210ENST00000490099 PP2D1A8MPX8 630 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 F8W810 466 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 TEX28O15482 410 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 NPTXRO95502 500 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 GJB2P29033 226 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 PLA2G5P39877 138 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 MTHFRP42898 656 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 NPTX2P47972 431 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 CLCN4P51793 760 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 ZXDAP98168 799 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 GRIK3Q13003 919 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 PRPF4BQ13523 1007 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 CUL4AQ13619 759 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 GNL2Q13823 731 aaKnown RBP10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 XKR4Q5GH76 650 aa10.73□□□□□ -0.69
TMEM39A-210ENST00000490099 KRT79Q5XKE5 535 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms