RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
USP48-210ENST00000489108 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.09■□□□□ 0.49
USP48-210ENST00000489108 ZSCAN32Q9NX65 697 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 CDV3Q9UKY7 258 aaKnown RBP18.09■□□□□ 0.49
USP48-210ENST00000489108 HES2Q9Y543 173 aa18.09■□□□□ 0.49
USP48-210ENST00000489108 NR1I2O75469 434 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 TDP2O95551 362 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 TGM1P22735 817 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 LAMTOR4Q0VGL1 99 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 FUT10Q6P4F1 479 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 TSSK4Q6SA08 328 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 PSPC1Q8WXF1 523 aaKnown RBP18.08■□□□□ 0.48
USP48-210ENST00000489108 SLC7A3Q8WY07 619 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 RABGGTAQ92696 567 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 MBOAT7Q96N66 472 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 OSBPL6Q9BZF3 934 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 LTB4R2Q9NPC1 389 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.48
USP48-210ENST00000489108 SMG5Q9UPR3 1016 aaKnown RBP18.08■□□□□ 0.48
USP48-210ENST00000489108 EML1O00423 815 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 LILRB5O75023 590 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 FGD1P98174 961 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 AKAP17AQ02040 695 aaKnown RBP18.07■□□□□ 0.48
USP48-210ENST00000489108 LMNB2Q03252 620 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 PRSS55Q6UWB4 352 aaPredicted RBP18.07■□□□□ 0.48
USP48-210ENST00000489108 GPR65Q8IYL9 337 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 RNF149Q8NC42 400 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 FGF13Q92913 245 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 CPB2Q96IY4 423 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 CEP170P1Q96L14 293 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 RTKNQ9BST9 563 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 APOL6Q9BWW8 343 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 EPC1Q9H2F5 836 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 DHX33Q9H6R0 707 aaKnown RBP18.07■□□□□ 0.48
USP48-210ENST00000489108 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
USP48-210ENST00000489108 USP18Q9UMW8 372 aa18.07■□□□□ 0.48
USP48-210ENST00000489108 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ERLIN2O94905 339 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 CPA1P15085 419 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 CYP3A7P24462 503 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ST3GAL2Q16842 350 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ZBTB41Q5SVQ8 909 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 MTSS1LQ765P7 747 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 CCDC148Q8NFR7 591 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ITFG1Q8TB96 612 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 NELL1Q92832 810 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 ADAM28Q9UKQ2 775 aa18.06■□□□□ 0.48
USP48-210ENST00000489108 MAP1BP46821 2468 aaKnown RBP18.06■□□□□ 0.48
USP48-210ENST00000489108 TSPAN1O60635 241 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
USP48-210ENST00000489108 NLRP5P59047 1200 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 NTRK3Q16288 839 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 RSPO2Q6UXX9 243 aaPredicted RBP18.05■□□□□ 0.48
USP48-210ENST00000489108 Q6ZUG5 572 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 FERMT3Q86UX7 667 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 EXOC8Q8IYI6 725 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 GSTCDQ8NEC7 633 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 CLDN23Q96B33 292 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 KXD1Q9BQD3 176 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 SLC26A6Q9BXS9 759 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 CSRNP2Q9H175 543 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 PARD6AQ9NPB6 346 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 WRAP73Q9P2S5 460 aaPredicted RBP18.05■□□□□ 0.48
USP48-210ENST00000489108 CACNG4Q9UBN1 327 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 FBXW11Q9UKB1 542 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 POLIQ9UNA4 740 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 GIT1Q9Y2X7 761 aa18.05■□□□□ 0.48
USP48-210ENST00000489108 CCL16O15467 120 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 ASAP2O43150 1006 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 TBC1D4O60343 1298 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 TADA2AO75478 443 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 ADRB1P08588 477 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 HNRNPA1P09651 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
USP48-210ENST00000489108 AKAP5P24588 427 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 TARSP26639 723 aaKnown RBP18.04■□□□□ 0.48
USP48-210ENST00000489108 AXLP30530 894 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 MAGEA9P43362 315 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 PFKPQ01813 784 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 CREMQ03060 361 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 RTP2Q5QGT7 225 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 PPM1LQ5SGD2 360 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 NOTUMQ6P988 496 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 BRF1Q92994 677 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 CLSTN3Q9BQT9 956 aa18.04■□□□□ 0.48
USP48-210ENST00000489108 RFC5P40937 340 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 KRT32Q14532 448 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 LIN9Q5TKA1 542 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 TPRG1Q6ZUI0 275 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 CCDC51Q96ER9 411 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 NELL2Q99435 816 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 PHF20Q9BVI0 1012 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 RNF26Q9BY78 433 aaPredicted RBP18.03■□□□□ 0.48
USP48-210ENST00000489108 NXF3Q9H4D5 531 aaKnown RBP18.03■□□□□ 0.48
USP48-210ENST00000489108 KLK14Q9P0G3 267 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 NOTCH4Q99466 2003 aa18.03■□□□□ 0.48
USP48-210ENST00000489108 ZFHX4Q86UP3 3567 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms