RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 CDT1Q9H211 546 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 KBTBD4Q9NVX7 518 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 PLAGL2Q9UPG8 496 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 PCDHB12Q9Y5F1 795 aa17.58■□□□□ 0.4
ERGIC3-216ENST00000488384 FRMD3A2A2Y4 597 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 NMT1P30419 496 aaKnown RBP17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 STRN3Q13033 797 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 CAMK1Q14012 370 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 ZNF568Q3ZCX4 644 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 KCNT2Q6UVM3 1135 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 ZNF558Q96NG5 402 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 GIT1Q9Y2X7 761 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 MUC3AQ02505 3323 aa17.57■□□□□ 0.4
ERGIC3-216ENST00000488384 ZC3H11AO75152 810 aaKnown RBP eCLIP17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 FGF18O76093 207 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 RECQL4O94761 1208 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 POMCP01189 267 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 PFKFB1P16118 471 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 GAP43P17677 238 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SCP2P22307 547 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 CMA1P23946 247 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 DNAJB1P25685 340 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SCNN1GP51170 649 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 BCAR1P56945 870 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 CCDC85BQ15834 202 aaPredicted RBP17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 PTPROQ16827 1216 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 ZPBP2Q6X784 338 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 ZNF280BQ86YH2 543 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 THNSL1Q8IYQ7 743 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SLC39A11Q8N1S5 342 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 CEP120Q8N960 986 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 GSTCDQ8NEC7 633 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SPPL3Q8TCT6 385 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 PPM1EQ8WY54 764 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 LMAN2LQ9H0V9 348 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 ST6GALNAC4Q9H4F1 302 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 NRDE2Q9H7Z3 1164 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 MIOSQ9NXC5 875 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SNTG2Q9NY99 539 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 KLK14Q9P0G3 267 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 SEL1LQ9UBV2 794 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 DNAJB4Q9UDY4 337 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 PARP2Q9UGN5 583 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 TBX20Q9UMR3 447 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
ERGIC3-216ENST00000488384 TDRD15B5MCY1 1934 aaKnown RBP17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 A0A1B0GVL5 298 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 TOM1L1O75674 476 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 PPP1R37O75864 691 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 DDHD2O94830 711 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 CSPG5O95196 566 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 PIGRP01833 764 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 IDEP14735 1019 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 PPM1AP35813 382 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 GTF2BQ00403 316 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 RNASELQ05823 741 aaKnown RBP17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 APBB1IPQ7Z5R6 666 aaPredicted RBP17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 TMEM173Q86WV6 379 aaPredicted RBP17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 MAP4K3Q8IVH8 894 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 KANSL3Q9P2N6 904 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 ANKFY1Q9P2R3 1169 aa17.55■□□□□ 0.4
ERGIC3-216ENST00000488384 MYO7AQ13402 2215 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 FAM237AA0A1B0GTK4 181 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 A0A1W2PQ27 194 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 A0A1W2PQ64 194 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 A0A1W2PQD8 194 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 ACTN4O43707 911 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 MCF2P10911 925 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 GRM5P41594 1212 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 SLC11A1P49279 550 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 DSC1Q08554 894 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 NOLC1Q14978 699 aaKnown RBP eCLIP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 TIGD5Q53EQ6 642 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 ZC2HC1CQ53FD0 456 aaPredicted RBP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 ZBTB33Q86T24 672 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 BCL7CQ8WUZ0 217 aaPredicted RBP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 POF1BQ8WVV4 589 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 BICD1Q96G01 975 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 ZBTB45Q96K62 511 aaPredicted RBP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 PYM1Q9BRP8 204 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 STRA6Q9BX79 667 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 LRRC27Q9C0I9 530 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 OLFML3Q9NRN5 406 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 TBC1D7Q9P0N9 293 aa17.54■□□□□ 0.4
ERGIC3-216ENST00000488384 GDAQ9Y2T3 454 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms