RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ROPN1BQ9BZX4 212 aaPredicted RBP15.25■□□□□ 0.03
RER1-207ENST00000488353 ROPN1Q9HAT0 212 aaPredicted RBP15.25■□□□□ 0.03
RER1-207ENST00000488353 KLHL14Q9P2G3 628 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 DBR1Q9UK59 544 aaKnown RBP15.25■□□□□ 0.03
RER1-207ENST00000488353 AJAP1Q9UKB5 411 aaPredicted RBP15.25■□□□□ 0.03
RER1-207ENST00000488353 DNM3Q9UQ16 869 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 UNC5CO95185 931 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 CNGA1P29973 690 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 PCK1P35558 622 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 KCNA1Q09470 495 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 LBRQ14739 615 aaKnown RBP15.25■□□□□ 0.03
RER1-207ENST00000488353 LRRC14Q15048 493 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 EDRF1Q3B7T1 1238 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 GALNT15Q8N3T1 639 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 TTLL6Q8N841 843 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 RNPEPL1Q9HAU8 725 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 TRIM33Q9UPN9 1127 aa15.25■□□□□ 0.03
RER1-207ENST00000488353 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 RIPK2O43353 540 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 AKAP3O75969 853 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 SPATA31C1P0DKV0 1188 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 GCLCP48506 637 aaPredicted RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 SGSM1Q2NKQ1 1148 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 PARP6Q2NL67 630 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 RBM26Q5T8P6 1007 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 DPY19L2P1Q6NXN4 242 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 SLFN12Q8IYM2 578 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ZFAND2BQ8WV99 257 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 RUNDC3BQ96NL0 473 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 ETNK1Q9HBU6 452 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.24■□□□□ 0.032e-7■■■■□ 20.8
RER1-207ENST00000488353 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 PODXLO00592 558 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 RARGP13631 454 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ATP6V1C1P21283 382 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ECE1P42892 770 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 SPIRE1Q08AE8 756 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 CCDC15Q0P6D6 951 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 RNF43Q68DV7 783 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ZC3H3Q8IXZ2 948 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 UHMK1Q8TAS1 419 aaKnown RBP15.24■□□□□ 0.03
RER1-207ENST00000488353 CYP2W1Q8TAV3 490 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ETNPPLQ8TBG4 499 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■□□□□ 10.4
RER1-207ENST00000488353 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 GRHL1Q9NZI5 618 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 PCDHB13Q9Y5F0 798 aa15.24■□□□□ 0.03
RER1-207ENST00000488353 ATRNL1Q5VV63 1379 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 TMEM120BA0PK00 339 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 SPDYE2BA6NHP3 402 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 EIF4E1BA6NMX2 242 aaKnown RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 DDX3YO15523 660 aaKnown RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 ENTPD3O75355 529 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 SPDYE6P0CI01 402 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 DPEP1P16444 411 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 HOXA13P31271 388 aaPredicted RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 DCAF12L1Q5VU92 463 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 RSBN1LQ6PCB5 846 aaPredicted RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 MAEAQ7L5Y9 396 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 FRMD5Q7Z6J6 570 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 ADAT2Q7Z6V5 191 aaKnown RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 MGARPQ8TDB4 240 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 TEKT4Q8WW24 435 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 BHMT2Q9H2M3 363 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 ERVK-5Q9HDB9 667 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 TXLNGQ9NUQ3 528 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 NKX1-2Q9UD57 310 aaPredicted RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 COL4A5P29400 1685 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 CYP3A7-CYP3A51PA0A087WV96 503 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 ATP5HO75947 161 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 GCNT3O95395 438 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 CYP3A7P24462 503 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 COPB2P35606 906 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 GALCP54803 685 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 SYT2Q8N9I0 419 aaPredicted RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 PIGOQ8TEQ8 1089 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 STK32AQ8WU08 396 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 CKAP2Q8WWK9 683 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 ITFG2Q969R8 447 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 PPP1R9AQ9ULJ8 1098 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 SCAF8Q9UPN6 1271 aaKnown RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 TRAF3IP3Q9Y228 551 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 ASB3Q9Y575 518 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 RGPD3A6NKT7 1758 aaPredicted RBP15.23■□□□□ 0.03
RER1-207ENST00000488353 RGPD4Q7Z3J3 1758 aa15.23■□□□□ 0.03
RER1-207ENST00000488353 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms