RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 PCBP1Q15365 356 aaKnown RBP eCLIP21.52■■□□□ 1.049e-6■□□□□ 9.5
CHRD-216ENST00000486066 ZNF528Q3MIS6 628 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 FGF14Q92915 247 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 CCDC51Q96ER9 411 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 B3GALT6Q96L58 329 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHRD-216ENST00000486066 HES2Q9Y543 173 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 ZFP37Q9Y6Q3 630 aaPredicted RBP21.52■■□□□ 1.04
CHRD-216ENST00000486066 VWA8A3KMH1 1905 aa21.52■■□□□ 1.04
CHRD-216ENST00000486066 ZMYM2Q9UBW7 1377 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 GAS2O43903 313 aaKnown RBP21.51■■□□□ 1.03
CHRD-216ENST00000486066 ZMYND10O75800 440 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 PDIA3P30101 505 aaKnown RBP21.51■■□□□ 1.03
CHRD-216ENST00000486066 AXLP30530 894 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 NLRP5P59047 1200 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 PTENP60484 403 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 FUT10Q6P4F1 479 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 GET4Q7L5D6 327 aaPredicted RBP21.51■■□□□ 1.03
CHRD-216ENST00000486066 PALB2Q86YC2 1186 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 EXOC8Q8IYI6 725 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 NELL1Q92832 810 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 CEP170P1Q96L14 293 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
CHRD-216ENST00000486066 XPNPEP1Q9NQW7 623 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 CHD8Q9HCK8 2581 aa21.51■■□□□ 1.03
CHRD-216ENST00000486066 ASAP2O43150 1006 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 P4HBP07237 508 aaKnown RBP21.5■■□□□ 1.03
CHRD-216ENST00000486066 RPS6KB1P23443 525 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 HSPA4P34932 840 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 USP41Q3LFD5 358 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 PARM1Q6UWI2 310 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 BLIDQ8IZY5 108 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 FAM177A1Q8N128 213 aaPredicted RBP21.5■■□□□ 1.03
CHRD-216ENST00000486066 BORCS6Q96GS4 357 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 DDX25Q9UHL0 483 aaKnown RBP21.5■■□□□ 1.03
CHRD-216ENST00000486066 FBXW11Q9UKB1 542 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 GIT1Q9Y2X7 761 aa21.5■■□□□ 1.03
CHRD-216ENST00000486066 GPC5P78333 572 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 FGD1P98174 961 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 POU5F1BQ06416 359 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 SPIRE1Q08AE8 756 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 EMC2Q15006 297 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 NOTUMQ6P988 496 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 ST13P5Q8NFI4 369 aaPredicted RBP21.49■■□□□ 1.03
CHRD-216ENST00000486066 JAKMIP1Q96N16 626 aaKnown RBP21.49■■□□□ 1.03
CHRD-216ENST00000486066 CSRNP2Q9H175 543 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 ADAM28Q9UKQ2 775 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 FBXO4Q9UKT5 387 aa21.49■■□□□ 1.03
CHRD-216ENST00000486066 KANSL1LA0AUZ9 987 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 DKC1O60832 514 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHRD-216ENST00000486066 RPL17P18621 184 aaKnown RBP21.48■■□□□ 1.03
CHRD-216ENST00000486066 RFX1P22670 979 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 MBTD1Q05BQ5 628 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 RTP2Q5QGT7 225 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 BLOC1S2Q6QNY1 142 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 SKAP1Q86WV1 359 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 HAS1Q92839 578 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 FAM20AQ96MK3 541 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 LXNQ9BS40 222 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 COLEC11Q9BWP8 271 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 OSBPL6Q9BZF3 934 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 NXF3Q9H4D5 531 aaKnown RBP21.48■■□□□ 1.03
CHRD-216ENST00000486066 PIDD1Q9HB75 910 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 CDH7Q9ULB5 785 aa21.48■■□□□ 1.03
CHRD-216ENST00000486066 MAP1BP46821 2468 aaKnown RBP21.48■■□□□ 1.03
CHRD-216ENST00000486066 ZBTB39O15060 712 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 SPTLC1O15269 473 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 YWHABP31946 246 aaKnown RBP21.47■■□□□ 1.03
CHRD-216ENST00000486066 INF2Q27J81 1249 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 RSPO4Q2I0M5 234 aaPredicted RBP21.47■■□□□ 1.03
CHRD-216ENST00000486066 PPP4R3AQ6IN85 833 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 ZBTB44Q8NCP5 570 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 TCP11Q8WWU5 503 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 SHDQ96IW2 340 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 CPB2Q96IY4 423 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 CLSTN3Q9BQT9 956 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 NFKBIZQ9BYH8 718 aa21.47■■□□□ 1.03
CHRD-216ENST00000486066 BMP2KQ9NSY1 1161 aaPredicted RBP21.47■■□□□ 1.03
CHRD-216ENST00000486066 MTF2Q9Y483 593 aaPredicted RBP21.47■■□□□ 1.03
CHRD-216ENST00000486066 USP24Q9UPU5 2620 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 CHD6Q8TD26 2715 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 KINO60870 393 aaKnown RBP21.46■■□□□ 1.03
CHRD-216ENST00000486066 LILRB5O75023 590 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 ERLIN2O94905 339 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 POU2F2P09086 479 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 ARF4P18085 180 aaPredicted RBP21.46■■□□□ 1.03
CHRD-216ENST00000486066 FSHRP23945 695 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 HOXA9P31269 272 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 CCT2P78371 535 aaKnown RBP21.46■■□□□ 1.03
CHRD-216ENST00000486066 CREMQ03060 361 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 PRKCQQ04759 706 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 EPHA7Q15375 998 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 GALNT17Q6IS24 598 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 PAAF1Q9BRP4 392 aa21.46■■□□□ 1.03
CHRD-216ENST00000486066 SHISA7A6NL88 538 aa21.45■■□□□ 1.02
CHRD-216ENST00000486066 DEXIO95424 95 aa21.45■■□□□ 1.02
CHRD-216ENST00000486066 HNRNPA1P09651 372 aaKnown RBP eCLIP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms