RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 HOXA2O43364 376 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 DGKIO75912 1065 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 KIF20AO95235 890 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 IBSPP21815 317 aaPredicted RBP21.79■■□□□ 1.08
COL6A2-208ENST00000485591 COBLL1Q53SF7 1204 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 SLFN12LQ6IEE8 588 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 TRIML1Q8N9V2 468 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 RNF169Q8NCN4 708 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 HAPLN2Q9GZV7 340 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 GBP3Q9H0R5 595 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 RC3H2Q9HBD1 1191 aaKnown RBP21.79■■□□□ 1.08
COL6A2-208ENST00000485591 HES2Q9Y543 173 aa21.79■■□□□ 1.08
COL6A2-208ENST00000485591 PDCD11Q14690 1871 aaKnown RBP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 TISP43B9A030 160 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 ITGA4P13612 1032 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 MATR3P43243 847 aaKnown RBP eCLIP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 HTRA4P83105 476 aaPredicted RBP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 KNOP1Q1ED39 458 aaKnown RBP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 LRIT3Q3SXY7 679 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 FAM117BQ6P1L5 589 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 ZBTB33Q86T24 672 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 NELFCDQ8IXH7 590 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 GUF1Q8N442 669 aaKnown RBP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 LPPQ93052 612 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 ZBED2Q9BTP6 218 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 RNF19AQ9NV58 838 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 TDRD15B5MCY1 1934 aaKnown RBP21.78■■□□□ 1.08
COL6A2-208ENST00000485591 KIAA1671Q9BY89 1806 aa21.78■■□□□ 1.08
COL6A2-208ENST00000485591 A0A0B4J269 797 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 MEIS3P2A8K0S8 358 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 GRXCR1A8MXD5 290 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 FGFR1P11362 822 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 GRM5P41594 1212 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 SNRPFP62306 86 aaKnown RBP21.77■■□□□ 1.08
COL6A2-208ENST00000485591 MORC3Q14149 939 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 AGMOQ6ZNB7 445 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 RSPH1Q8WYR4 309 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 ZNF689Q96CS4 500 aaPredicted RBP21.77■■□□□ 1.08
COL6A2-208ENST00000485591 UBN1Q9NPG3 1134 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 INSL6Q9Y581 213 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 PCDHA11Q9Y5I1 949 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 ANK1P16157 1881 aa21.77■■□□□ 1.08
COL6A2-208ENST00000485591 TRIP11Q15643 1979 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 TGFB1I1O43294 461 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 TLL1O43897 1013 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 HARSP12081 509 aaKnown RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 GARTP22102 1010 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 ADSSP30520 456 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 SMAD3P84022 425 aaKnown RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 KLHL40Q2TBA0 621 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 CLLU1OSQ5K130 101 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 CCDC183Q5T5S1 534 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 RBM43Q6ZSC3 357 aaKnown RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 HS2ST1Q7LGA3 356 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 NLRC5Q86WI3 1866 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 SMYD4Q8IYR2 804 aaPredicted RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 CEP120Q8N960 986 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 POMGNT1Q8WZA1 660 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 YME1L1Q96TA2 773 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 RAD9AQ99638 391 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 CCDC94Q9BW85 323 aaPredicted RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 APOL6Q9BWW8 343 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 RNF39Q9H2S5 420 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 KCTD10Q9H3F6 313 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 RSAD1Q9HA92 442 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 CGNQ9P2M7 1197 aaKnown RBP21.76■■□□□ 1.07
COL6A2-208ENST00000485591 GIT1Q9Y2X7 761 aa21.76■■□□□ 1.07
COL6A2-208ENST00000485591 BIN1O00499 593 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 OGTO15294 1046 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 FAM189A1O60320 539 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 BMP6P22004 513 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 GATMP50440 423 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 RABGGTBP53611 331 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 RAB30Q15771 203 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 KYAT1Q16773 422 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 ARMCX5Q6P1M9 558 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 GLB1LQ6UWU2 654 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 THNSL1Q8IYQ7 743 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 CMTR2Q8IYT2 770 aaKnown RBP21.75■■□□□ 1.07
COL6A2-208ENST00000485591 ABI1Q8IZP0 508 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 SP7Q8TDD2 431 aaPredicted RBP21.75■■□□□ 1.07
COL6A2-208ENST00000485591 MSTO1Q9BUK6 570 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 TMEM117Q9H0C3 514 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 AGPAT3Q9NRZ7 376 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 TYW1Q9NV66 732 aaKnown RBP21.75■■□□□ 1.07
COL6A2-208ENST00000485591 SNTG2Q9NY99 539 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 AGO2Q9UKV8 859 aaKnown RBP21.75■■□□□ 1.07
COL6A2-208ENST00000485591 MAPK8IP1Q9UQF2 711 aa21.75■■□□□ 1.07
COL6A2-208ENST00000485591 KIAA0391O15091 583 aaKnown RBP21.74■■□□□ 1.07
COL6A2-208ENST00000485591 INPPL1O15357 1258 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 RECQL4O94761 1208 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 AKAP5P24588 427 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 PPP1R2P41236 205 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 PRCPP42785 496 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 ISM2Q6H9L7 571 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 C12orf56Q8IXR9 622 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 GOLGA5Q8TBA6 731 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 HELQQ8TDG4 1101 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 CBWD1Q9BRT8 395 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 PBX4Q9BYU1 374 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms