RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 RNF169Q8NCN4 708 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ITFG1Q8TB96 612 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 HELQQ8TDG4 1101 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SYTL5Q8TDW5 730 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CSGALNACT1Q8TDX6 532 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 BCL7CQ8WUZ0 217 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 FGF11Q92914 225 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 TNPO1Q92973 898 aaKnown RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MOCOSQ96EN8 888 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CAMK1GQ96NX5 476 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 DBNDD2Q9BQY9 259 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 VN1R3Q9BXE9 311 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ARMT1Q9H993 441 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 ERAP1Q9NZ08 941 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 EBF1Q9UH73 591 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 GINS2Q9Y248 185 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 BOLA1Q9Y3E2 137 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 AK5Q9Y6K8 562 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 FPGT-TNNI3KV9GXZ4 949 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 CACNA1EQ15878 2313 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MYH8P13535 1937 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 PLXNB3Q9ULL4 1909 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 POLQO75417 2590 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 SDK1Q7Z5N4 2213 aa4.3□□□□□ -1.72
CAPN8-210ENST00000484873 MUC22E2RYF6 1773 aaPredicted RBP4.3□□□□□ -1.72
CAPN8-210ENST00000484873 GREB1LQ9C091 1923 aaPredicted RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PTPRCP08575 1304 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 ZNF532Q9HCE3 1301 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 LAMA1P25391 3075 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 ABCA2Q9BZC7 2435 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 NBPF19A0A087WUL8 3843 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 FAM149AA5PLN7 773 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PLK4O00444 970 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PRKAB2O43741 272 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 DKK1O94907 266 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 APBB3O95704 486 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 SERPINF2P08697 491 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 HSPD1P10809 573 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 KRT10P13645 584 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PDE6AP16499 860 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 GRNP28799 593 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 HOXA9P31269 272 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 SLC16A2P36021 539 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 GLUD2P49448 558 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 KPNA1P52294 538 aaPredicted RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 IGBP1P78318 339 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 EXOSC9Q06265 439 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 G3BP1Q13283 466 aaKnown RBP eCLIP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 SMAD1Q15797 465 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 CCDC96Q2M329 555 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 USH1GQ495M9 461 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PABPC1LQ4VXU2 614 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 TNNI3KQ59H18 835 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PPM1LQ5SGD2 360 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 LIN9Q5TKA1 542 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 TANGO2Q6ICL3 276 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 BTNL9Q6UXG8 535 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 ECHDC2Q86YB7 292 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PALB2Q86YC2 1186 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 MARCH9Q86YJ5 346 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 DEPDC1BQ8WUY9 529 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 SNRNP27Q8WVK2 155 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 CHMP4CQ96CF2 233 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 GAD1Q99259 594 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 FZD8Q9H461 694 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 ANTXR1Q9H6X2 564 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 RXFP1Q9HBX9 757 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PXMP2Q9NR77 195 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 SLC6A14Q9UN76 642 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 POLIQ9UNA4 740 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 NOC2LQ9Y3T9 749 aaKnown RBP4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PCDHA2Q9Y5H9 948 aa4.29□□□□□ -1.72
CAPN8-210ENST00000484873 PLIN4Q96Q06 1357 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 PCNX1Q96RV3 2341 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 ZBED9Q6R2W3 1325 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 PHLPP2Q6ZVD8 1323 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 SPAG17Q6Q759 2223 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 ASCC3Q8N3C0 2202 aaKnown RBP4.28□□□□□ -1.72
CAPN8-210ENST00000484873 A0A0U1RQF3 1178 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 SMIM35A0A1B0GVV1 85 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 MYBPHLA2RUH7 354 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 SLC38A8A6NNN8 435 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 SPECC1L-ADORA2AF8WAN1 911 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 ARHGAP33O14559 1287 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 CBFA2T3O75081 653 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 MBD4O95243 580 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 SYPP08247 313 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 POU2F2P09086 479 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 TSPY3P0CV98 308 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 TSPY8P0CW00 308 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 MYCLP12524 364 aaPredicted RBP4.28□□□□□ -1.72
CAPN8-210ENST00000484873 FCARP24071 287 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 MARK3P27448 753 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 CTHP32929 405 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 ACTN2P35609 894 aa4.28□□□□□ -1.72
CAPN8-210ENST00000484873 HNF1BP35680 557 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms