RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CDT1Q9H211 546 aa17.85■□□□□ 0.45
COL2A1-206ENST00000483376 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
COL2A1-206ENST00000483376 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
COL2A1-206ENST00000483376 TBC1D13Q9NVG8 400 aa17.85■□□□□ 0.45
COL2A1-206ENST00000483376 PVALEFA0A1B0GWK0 134 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 FOSL2P15408 326 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 LIG1P18858 919 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 GRM5P41594 1212 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 NDUFA8P51970 172 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 UBE3AQ05086 875 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 MCL1Q07820 350 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 EHHADHQ08426 723 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 HERC4Q5GLZ8 1057 aaPredicted RBP17.84■□□□□ 0.45
COL2A1-206ENST00000483376 UNC13DQ70J99 1090 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 CDR2LQ86X02 465 aaPredicted RBP17.84■□□□□ 0.45
COL2A1-206ENST00000483376 FSIP1Q8NA03 581 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 TMEM87AQ8NBN3 555 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 ZHX3Q9H4I2 956 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 CERS4Q9HA82 394 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 HES2Q9Y543 173 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 PCDHB12Q9Y5F1 795 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 NLRC5Q86WI3 1866 aa17.84■□□□□ 0.45
COL2A1-206ENST00000483376 EYSQ5T1H1 3165 aa17.83■□□□□ 0.45
COL2A1-206ENST00000483376 ARL5CA6NH57 179 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 IDEP14735 1019 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 IBSPP21815 317 aaPredicted RBP17.83■□□□□ 0.44
COL2A1-206ENST00000483376 NMT1P30419 496 aaKnown RBP17.83■□□□□ 0.44
COL2A1-206ENST00000483376 PPM1AP35813 382 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 PLCB3Q01970 1234 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 COASYQ13057 564 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 ZNF568Q3ZCX4 644 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 LONRF3Q496Y0 759 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 COLGALT1Q8NBJ5 622 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 TMEM175Q9BSA9 504 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 MRPL44Q9H9J2 332 aaKnown RBP17.83■□□□□ 0.44
COL2A1-206ENST00000483376 SERTAD1Q9UHV2 236 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 LZTS1Q9Y250 596 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 USP20Q9Y2K6 914 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 PCDHB13Q9Y5F0 798 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 MTCH2Q9Y6C9 303 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 STYXL1Q9Y6J8 313 aa17.83■□□□□ 0.44
COL2A1-206ENST00000483376 GTPBP6O43824 516 aaPredicted RBP17.82■□□□□ 0.44
COL2A1-206ENST00000483376 ASIC1P78348 528 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 DSC1Q08554 894 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 GPM6BQ13491 265 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL2A1-206ENST00000483376 KYAT1Q16773 422 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 PTPROQ16827 1216 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 XKR4Q5GH76 650 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 KCNT2Q6UVM3 1135 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 STAMQ92783 540 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 MRPL38Q96DV4 380 aaKnown RBP17.82■□□□□ 0.44
COL2A1-206ENST00000483376 PAGE5Q96GU1 130 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 ZNF558Q96NG5 402 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 GAD1Q99259 594 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 GOLPH3LQ9H4A5 285 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 NRDE2Q9H7Z3 1164 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 MTUS1Q9ULD2 1270 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 PLAGL2Q9UPG8 496 aa17.82■□□□□ 0.44
COL2A1-206ENST00000483376 COL4A4P53420 1690 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 HNRNPDLO14979 420 aaKnown RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 EIF3DO15371 548 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 CLDN3O15551 220 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 RECQL4O94761 1208 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 MLH1P40692 756 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 LIG4P49917 911 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 POU5F1Q01860 360 aaKnown RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 GRIK3Q13003 919 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 L1TD1Q5T7N2 865 aaKnown RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 CLEC17AQ6ZS10 378 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 STXBP4Q6ZWJ1 553 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 SLC39A11Q8N1S5 342 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 KLHL23Q8NBE8 558 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 CCDC34Q96HJ3 373 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 CCDC94Q9BW85 323 aaPredicted RBP17.81■□□□□ 0.44
COL2A1-206ENST00000483376 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 SNTG2Q9NY99 539 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 HCSTQ9UBK5 93 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 STK39Q9UEW8 545 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 EXOC7Q9UPT5 735 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 KIAA1671Q9BY89 1806 aa17.81■□□□□ 0.44
COL2A1-206ENST00000483376 UBE4BO95155 1302 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 A0A0B4J269 797 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 RFXAPO00287 272 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 FAM189A1O60320 539 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 ZNF202O95125 648 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 ITGB1P05556 798 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 AKAP5P24588 427 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 ALDH7A1P49419 539 aaKnown RBP17.8■□□□□ 0.44
COL2A1-206ENST00000483376 AFF1P51825 1210 aaKnown RBP17.8■□□□□ 0.44
COL2A1-206ENST00000483376 BCAR1P56945 870 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 RNASELQ05823 741 aaKnown RBP17.8■□□□□ 0.44
COL2A1-206ENST00000483376 CUL4BQ13620 913 aa17.8■□□□□ 0.44
COL2A1-206ENST00000483376 ZC2HC1CQ53FD0 456 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms