RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 TTLL11Q8NHH1 800 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 CEP70Q8NHQ1 597 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 CYP2W1Q8TAV3 490 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 MGARPQ8TDB4 240 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 FATE1Q969F0 183 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 SDCCAG3Q96C92 435 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 CHAMP1Q96JM3 812 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 COX4I2Q96KJ9 171 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 SLC2A13Q96QE2 648 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 PDCD2LQ9BRP1 358 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 WDR18Q9BV38 432 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 ACE2Q9BYF1 805 aaPredicted RBP5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 PIDD1Q9HB75 910 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 CYP4F12Q9HCS2 524 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 NECTIN3Q9NQS3 549 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 GFOD1Q9NXC2 390 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 CBLCQ9ULV8 474 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 SLC6A14Q9UN76 642 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 SRPK3Q9UPE1 567 aa5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 RSF1Q96T23 1441 aaPredicted RBP5.72□□□□□ -1.49
R3HDM1-216ENST00000483065 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 IPO5O00410 1097 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 AP3D1O14617 1153 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 HTRA2O43464 458 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 TSPAN3O60637 253 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 MSCO60682 206 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 B3GALNT1O75752 331 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 LRIG2O94898 1065 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ADAMTS2O95450 1211 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CHGBP05060 677 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 HSPA1AP0DMV8 641 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 HSPA1BP0DMV9 641 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ZSCAN22P10073 491 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 GNAT1P11488 350 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 MTHFD1P11586 935 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 KRT15P19012 456 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CD33P20138 364 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 FGFR2P21802 821 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 PSMA4P25789 261 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 HOXD13P35453 343 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 FMO1Q01740 532 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CHAF1BQ13112 559 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 MAMLD1Q13495 774 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 DLGAP5Q15398 846 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 C5orf22Q49AR2 442 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 SLC44A4Q53GD3 710 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CT83Q5H943 113 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 RCSD1Q6JBY9 416 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ACAD10Q6JQN1 1059 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CCDC62Q6P9F0 684 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CNSTQ6PJW8 725 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 KLHL17Q6TDP4 642 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 GATAD2AQ86YP4 633 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 RIOX2Q8IUF8 465 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 NOSTRINQ8IVI9 506 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 NGEFQ8N5V2 710 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 THAP4Q8WY91 577 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 EAF2Q96CJ1 260 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 EID2BQ96D98 161 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ZNF845Q96IR2 970 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CFAP53Q96M91 514 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 YME1L1Q96TA2 773 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 MMP19Q99542 508 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 PRDM14Q9GZV8 571 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 DHX36Q9H2U1 1008 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 RABEP2Q9H5N1 569 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 XAB2Q9HCS7 855 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 SARS2Q9NP81 518 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 EIF2B3Q9NR50 452 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 CHST7Q9NS84 486 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 TBC1D29Q9UFV1 150 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 AFF4Q9UHB7 1163 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 HERC5Q9UII4 1024 aaKnown RBP5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ITGB1BP2Q9UKP3 347 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 KCNH3Q9ULD8 1083 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 TBX20Q9UMR3 447 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 EDARQ9UNE0 448 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 ZNF711Q9Y462 761 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 PCDHGC5Q9Y5F6 944 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 PCDHA2Q9Y5H9 948 aa5.71□□□□□ -1.5
R3HDM1-216ENST00000483065 IGF1RP08069 1367 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 H3BUI4 141 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 MPHOSPH10O00566 681 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 FSCN2O14926 492 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 SIGLEC6O43699 453 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 BNIP3LO60238 219 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 DOK2O60496 412 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 SRGAP2BP0DMP2 458 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 P4HA1P13674 534 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 PLS3P13797 630 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 ENDOUP21128 410 aaKnown RBP5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 ATP5F1P24539 256 aaPredicted RBP5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 AARSP49588 968 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 MCM2P49736 904 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 TUBP50607 506 aa5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 FXR1P51114 621 aaKnown RBP eCLIP5.7□□□□□ -1.5
R3HDM1-216ENST00000483065 MAP2K6P52564 334 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms