RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 Q6ZUG5 572 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 SRGAP1Q7Z6B7 1085 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 SMG8Q8ND04 991 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 CNNM3Q8NE01 707 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 HDAC7Q8WUI4 952 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 PRPF31Q8WWY3 499 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 PSPC1Q8WXF1 523 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 SLC7A3Q8WY07 619 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 FGF14Q92915 247 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 BRF1Q92994 677 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 SHDQ96IW2 340 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 CEP170P1Q96L14 293 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 EIF2AQ9BY44 585 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 RNF26Q9BY78 433 aaPredicted RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 MFRPQ9BY79 579 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 PRKD2Q9BZL6 878 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 NT5C3AQ9H0P0 336 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 NXF3Q9H4D5 531 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 PLEKHA4Q9H4M7 779 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 SPATA6Q9NWH7 488 aaPredicted RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.15□□□□□ -1.42
TFE3-202ENST00000481606 SMG5Q9UPR3 1016 aaKnown RBP6.15□□□□□ -1.42
TFE3-202ENST00000481606 HES2Q9Y543 173 aa6.15□□□□□ -1.42
TFE3-202ENST00000481606 TPRP12270 2363 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 KANSL1LA0AUZ9 987 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 EML1O00423 815 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CCL16O15467 120 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 SLC37A4O43826 429 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 TSPAN1O60635 241 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 NR1I2O75469 434 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 ZMYND10O75800 440 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 PAPLNO95428 1278 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 EFEMP2O95967 443 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 HMGB1P09429 215 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 TIE1P35590 1138 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 RFC5P40937 340 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 QARSP47897 775 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 STARD6P59095 220 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 GPC5P78333 572 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 NTHL1P78549 312 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CREMQ03060 361 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CSTF1Q05048 431 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 LAMTOR4Q0VGL1 99 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 SNW1Q13573 536 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 E2F4Q16254 413 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 NTRK3Q16288 839 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 USP41Q3LFD5 358 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 TSGA10IPQ3SY00 556 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 VARS2Q5ST30 1063 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 LIN9Q5TKA1 542 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 PRSS55Q6UWB4 352 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 PARM1Q6UWI2 310 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 GRASPQ7Z6J2 395 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 MAML2Q8IZL2 1156 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 RNF149Q8NC42 400 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 ETNPPLQ8TBG4 499 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CCDC51Q96ER9 411 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CPB2Q96IY4 423 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 ZFP42Q96MM3 310 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 JAKMIP1Q96N16 626 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 KXD1Q9BQD3 176 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 LXNQ9BS40 222 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 RPP25Q9BUL9 199 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 COLEC11Q9BWP8 271 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 BCO2Q9BYV7 579 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 C22orf23Q9BZE7 217 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 GPR62Q9BZJ7 368 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 TRIM6Q9C030 488 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 DHX33Q9H6R0 707 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 LTB4R2Q9NPC1 389 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 UBN1Q9NPG3 1134 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.14□□□□□ -1.43
TFE3-202ENST00000481606 CHST7Q9NS84 486 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 MIOSQ9NXC5 875 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 WRAP73Q9P2S5 460 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 CACNG4Q9UBN1 327 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 DDX25Q9UHL0 483 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 FBXW11Q9UKB1 542 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 FBXO4Q9UKT5 387 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CDV3Q9UKY7 258 aaKnown RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 CDH7Q9ULB5 785 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 USP18Q9UMW8 372 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 PCDHA4Q9UN74 947 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 POLIQ9UNA4 740 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 GTF3C3Q9Y5Q9 886 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 ZFP37Q9Y6Q3 630 aaPredicted RBP6.14□□□□□ -1.43
TFE3-202ENST00000481606 SPTBN2O15020 2390 aa6.14□□□□□ -1.43
TFE3-202ENST00000481606 CYP3A7-CYP3A51PA0A087WV96 503 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 INO80B-WBP1J3KQ70 363 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 DKC1O60832 514 aaKnown RBP eCLIP6.13□□□□□ -1.43
TFE3-202ENST00000481606 C8AP07357 584 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 IFNAR1P17181 557 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 CYP3A7P24462 503 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 TARSP26639 723 aaKnown RBP6.13□□□□□ -1.43
TFE3-202ENST00000481606 YWHABP31946 246 aaKnown RBP6.13□□□□□ -1.43
TFE3-202ENST00000481606 CCT2P78371 535 aaKnown RBP6.13□□□□□ -1.43
TFE3-202ENST00000481606 LMNB2Q03252 620 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 PRKCQQ04759 706 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 GRIK3Q13003 919 aa6.13□□□□□ -1.43
TFE3-202ENST00000481606 PPP2R5CQ13362 524 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms