RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 CPS1P31327 1500 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SOWAHDA6NJG2 315 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 EIF3DO15371 548 aaKnown RBP eCLIP10.07□□□□□ -0.8
GARNL3-216ENST00000481242 HOXA2O43364 376 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 DNAJC8O75937 253 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-216ENST00000481242 FGGP02679 453 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 CCT5P48643 541 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 BCAR1P56945 870 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
GARNL3-216ENST00000481242 BCAS4Q8TDM0 211 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 MED15Q96RN5 788 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 EFHD1Q9BUP0 239 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF609O15014 1411 aa10.07□□□□□ -0.8
GARNL3-216ENST00000481242 EMSYQ7Z589 1322 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 TADA2AO75478 443 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 CYP2C9P11712 490 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 ATP1A3P13637 1013 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 TMEM132DQ14C87 1099 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 GNASQ5JWF2 1037 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 HEATR6Q6AI08 1181 aaKnown RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 IGSF9BQ9UPX0 1349 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 STK25O00506 426 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 LAMB3Q13751 1172 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 EMC2Q15006 297 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 DAGLBQ8NCG7 672 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 UHMK1Q8TAS1 419 aaKnown RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 PRDM5Q9NQX1 630 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 LRRC53A6NM62 1247 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 ITGA4P13612 1032 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 MAPRE1Q15691 268 aaKnown RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 STOX1Q6ZVD7 989 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 CD302Q8IX05 232 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 PCSK9Q8NBP7 692 aaKnown RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 DEPDC1BQ8WUY9 529 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 LRGUKQ96M69 825 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 POLR3CQ9BUI4 534 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 JMJD4Q9H9V9 463 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 PDE11AQ9HCR9 933 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 DYRK4Q9NR20 520 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 TJP2Q9UDY2 1190 aa10.06□□□□□ -0.8
GARNL3-216ENST00000481242 FBXO2Q9UK22 296 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-216ENST00000481242 ACADSBP45954 432 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 FXR2P51116 673 aaKnown RBP eCLIP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 BACE1P56817 501 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 KLHL38Q2WGJ6 581 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 WDR72Q3MJ13 1102 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 SV2CQ496J9 727 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 C9orf131Q5VYM1 1079 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 GBA2Q9HCG7 927 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 CXCL11O14625 94 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 PLSCR1O15162 318 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 NKRFO15226 690 aaKnown RBP eCLIP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 BNIP3LO60238 219 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 RHOBTB3O94955 611 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 MX2P20592 715 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 CHRNA3P32297 505 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 EPHX2P34913 555 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 PRKCEQ02156 737 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 NOTUMQ6P988 496 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 ASIC4Q96FT7 647 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 SP110Q9HB58 689 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 IRAK4Q9NWZ3 460 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 UVRAGQ9P2Y5 699 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 MST1RQ04912 1400 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 FAM170AA1A519 330 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 GRID2IPA4D2P6 1211 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 HGSO14964 777 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 PSMD3O43242 534 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 DDX5P17844 614 aaKnown RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 IFNA8P32881 189 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF484Q5JVG2 852 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 FKBP1CQ5VVH2 108 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 CCDC197Q8NCU1 140 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 C18orf8Q96DM3 657 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 ATG4CQ96DT6 458 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 HSPBP1Q9NZL4 362 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 RGL1Q9NZL6 768 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 AGAP1Q9UPQ3 857 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 KIDINS220Q9ULH0 1771 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 SLC4A1P02730 911 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 FTLP02792 175 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 SUPT20HL2P0C7V6 817 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 STKLD1Q8NE28 680 aa10.05□□□□□ -0.8
GARNL3-216ENST00000481242 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-216ENST00000481242 GMCL1Q96IK5 515 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms