RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 AP4S1Q9Y587 144 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 CCT8L1PA6NM43 557 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT1P04264 644 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 ITGALP20701 1170 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 EEF1GP26641 437 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SKIV2L2P42285 1042 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 METAP2P50579 478 aaKnown RBP eCLIP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 MTERF2Q49AM1 385 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 DGKKQ5KSL6 1271 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 RHOT2Q8IXI1 618 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SIX6OS1Q8N1H7 587 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 RBM46Q8TBY0 533 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM47Q96LD4 638 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 FRMD6Q96NE9 622 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SRPK1Q96SB4 655 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 PSMB7Q99436 277 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 RPRD1BQ9NQG5 326 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SNX6Q9UNH7 406 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 APOBEC2Q9Y235 224 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 MAGEB16A2A368 324 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SPDYE5A6NIY4 337 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 PSMD11O00231 422 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 CAPN15O75808 1086 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 RASSF9O75901 435 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 WDR47O94967 919 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 TBC1D8O95759 1140 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 ZBED1O96006 694 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 S100A6P06703 90 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 ZNF18P17022 549 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 MCM7P33993 719 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT9P35527 623 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SOX5P35711 763 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 TGFB2P61812 414 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 PLCB3Q01970 1234 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 POLA2Q14181 598 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 PRR23BQ6ZRT6 265 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 GPR141Q7Z602 305 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SLC35F6Q8N357 371 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 PPHLN1Q8NEY8 458 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 S100PBPQ96BU1 408 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 DCPSQ96C86 337 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SENP7Q9BQF6 1050 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 LLPHQ9BRT6 129 aaKnown RBP4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 GINM1Q9NU53 330 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 MCM9Q9NXL9 1143 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 GIN1Q9NXP7 522 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SPATA2Q9UM82 520 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 NALCNQ8IZF0 1738 aa4.81□□□□□ -1.64
GPCPD1-205ENST00000481038 SYNJ2BP-COX16A0A087WUM0 186 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 EIF3BP55884 814 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 SLC15A2Q16348 729 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 LRRC36Q1X8D7 754 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 WDR45BQ5MNZ6 344 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 DHX32Q7L7V1 743 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 DTX3LQ8TDB6 740 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 ATP6V1G3Q96LB4 118 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 FAM161BQ96MY7 647 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 MOV10Q9HCE1 1003 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 C6orf50Q9HD87 102 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 SNRKQ9NRH2 765 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 TTC7AQ9ULT0 858 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 RBM8AQ9Y5S9 174 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 TTI1O43156 1089 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 TMCC2O75069 709 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 KRT36O76013 467 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM49P0CI25 452 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 TRIM49CP0CI26 452 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 IL32P24001 234 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 AMPD3Q01432 767 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 USF2Q15853 346 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 RTN1Q16799 776 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 SFR1Q86XK3 245 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 ZNF34Q8IZ26 560 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 COX4I2Q96KJ9 171 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 MRPL1Q9BYD6 325 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 MTFR1LQ9H019 292 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 PLEKHA5Q9HAU0 1116 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 FANCEQ9HB96 536 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 SUN2Q9UH99 717 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 ASIC3Q9UHC3 531 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 VPS4AQ9UN37 437 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 PA2G4Q9UQ80 394 aaKnown RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 LRCH1Q9Y2L9 728 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 MAGED1Q9Y5V3 778 aaPredicted RBP4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 BCL9O00512 1426 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 A0A0G2JPF8 293 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 A0A1W2PQ72 361 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 CCDC85CA6NKD9 419 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 HNRNPCL3B7ZW38 293 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 AREL1O15033 823 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 ADCY6O43306 1168 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 STX10O60499 249 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 HNRNPCL4P0DMR1 293 aa4.8□□□□□ -1.64
GPCPD1-205ENST00000481038 JAK1P23458 1154 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms