RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 TRIM42Q8IWZ5 723 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 DHX37Q8IY37 1157 aaKnown RBP6.37□□□□□ -1.39
LINC02040-201ENST00000481004 FANCBQ8NB91 859 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 C2CD4AQ8NCU7 369 aaPredicted RBP6.37□□□□□ -1.39
LINC02040-201ENST00000481004 SLC17A8Q8NDX2 589 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 CTCFLQ8NI51 663 aaPredicted RBP6.37□□□□□ -1.39
LINC02040-201ENST00000481004 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 RRP36Q96EU6 259 aaKnown RBP6.37□□□□□ -1.39
LINC02040-201ENST00000481004 PGBD1Q96JS3 809 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 SPATA33Q96N06 139 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 NEK1Q96PY6 1258 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 GPR20Q99678 358 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 FAM83CQ9BQN1 747 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 MTA3Q9BTC8 594 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 NKX2-4Q9H2Z4 354 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 KRT82Q9NSB4 513 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 TMEM260Q9NX78 707 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 MAP3K20Q9NYL2 800 aaKnown RBP6.37□□□□□ -1.39
LINC02040-201ENST00000481004 AP4E1Q9UPM8 1137 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 SNX14Q9Y5W7 946 aa6.37□□□□□ -1.39
LINC02040-201ENST00000481004 NID2Q14112 1375 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 LCHNA4D1U4 455 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 CCDC69A6NI79 296 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 STXBP3O00186 592 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 KPNA6O60684 536 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DTNBO60941 627 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 ECEL1O95672 775 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 LGALS2P05162 132 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 CKBP12277 381 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 KCNA2P16389 499 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 NME2P22392 152 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 KIF5BP33176 963 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 HSPA4P34932 840 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 ADAM17P78536 824 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DEFB103AP81534 67 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 PTPN11Q06124 597 aaPredicted RBP6.36□□□□□ -1.39
LINC02040-201ENST00000481004 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DGKDQ16760 1214 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 SGO2Q562F6 1265 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 PAOXQ6QHF9 649 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DNAJC14Q6Y2X3 702 aaPredicted RBP6.36□□□□□ -1.39
LINC02040-201ENST00000481004 CYFIP1Q7L576 1253 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DYMQ7RTS9 669 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 NPAS4Q8IUM7 802 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 SULF2Q8IWU5 870 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 MAFAQ8NHW3 353 aaPredicted RBP6.36□□□□□ -1.39
LINC02040-201ENST00000481004 ZBTB10Q96DT7 871 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 PCYT2Q99447 389 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 MPHOSPH6Q99547 160 aaKnown RBP6.36□□□□□ -1.39
LINC02040-201ENST00000481004 DUSP9Q99956 384 aaKnown RBP6.36□□□□□ -1.39
LINC02040-201ENST00000481004 SEZ6LQ9BYH1 1024 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 PRDM12Q9H4Q4 367 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 UBIAD1Q9Y5Z9 338 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
LINC02040-201ENST00000481004 MYO9BQ13459 2157 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 KIAA1671Q9BY89 1806 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 TMEM265A0A087WTH1 108 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 KLF18A0A0U1RQI7 1052 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 GSTTP1A0A1W2PQM5 241 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 HMX2A2RU54 273 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 B4DLN1 442 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 RFXAPO00287 272 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 FIBPO43427 364 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 PPFIA4O75335 1185 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CXCL10P02778 98 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CA3P07451 260 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SUPT20HL2P0C7V6 817 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SMIM10L2AP0DMW4 78 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SMIM10L2BP0DMW5 78 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 TGFB3P10600 412 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CASTP20810 708 aaKnown RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 ARNTP27540 789 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 MRPL12P52815 198 aaKnown RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SP4Q02446 784 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 ITGB3BPQ13352 177 aaPredicted RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 NTRK3Q16288 839 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 PKN1Q16512 942 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 ZNF618Q5T7W0 954 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 RNF43Q68DV7 783 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 KRT40Q6A162 431 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 METTL7BQ6UX53 244 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 RUFY4Q6ZNE9 571 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 Q6ZUG5 572 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 LRRC8DQ7L1W4 858 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 HEATR3Q7Z4Q2 680 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SERINC5Q86VE9 423 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 TMTC2Q8N394 836 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SAMD3Q8N6K7 520 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 GIMAP7Q8NHV1 300 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 SMARCC2Q8TAQ2 1214 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CRYGNQ8WXF5 182 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CCDC136Q96JN2 1154 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 JAKMIP1Q96N16 626 aaKnown RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 LZTS2Q9BRK4 669 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 AGXT2Q9BYV1 514 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 RNPEPQ9H4A4 650 aa6.35□□□□□ -1.39
LINC02040-201ENST00000481004 CCDC86Q9H6F5 360 aaKnown RBP6.35□□□□□ -1.39
LINC02040-201ENST00000481004 PSTPIP2Q9H939 334 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms