RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 ARL5CA6NH57 179 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 MEIS3P2A8K0S8 358 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 RFXAPO00287 272 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 ABLIM1O14639 778 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
C9orf3-217ENST00000479161 NPTXRO95502 500 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 MYL1P05976 194 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 MCF2P10911 925 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 ALDH7A1P49419 539 aaKnown RBP16.98■□□□□ 0.31
C9orf3-217ENST00000479161 KYAT1Q16773 422 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 KLHL23Q8NBE8 558 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 ZNF558Q96NG5 402 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 C7orf25Q9BPX7 421 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 PANK2Q9BZ23 570 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 TRIM9Q9C026 710 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 NXF3Q9H4D5 531 aaKnown RBP16.98■□□□□ 0.31
C9orf3-217ENST00000479161 MTUS1Q9ULD2 1270 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 TBX20Q9UMR3 447 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
C9orf3-217ENST00000479161 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 PPP1R37O75864 691 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 ITGB1P05556 798 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 SLFN14P0C7P3 912 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 IGFBP4P22692 258 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 GRM5P41594 1212 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
C9orf3-217ENST00000479161 DSC1Q08554 894 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 MPZL3Q6UWV2 235 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 MAP4K3Q8IVH8 894 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 GSTCDQ8NEC7 633 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 GDPD5Q8WTR4 605 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 TARS2Q9BW92 718 aaKnown RBP16.97■□□□□ 0.31
C9orf3-217ENST00000479161 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 NRDE2Q9H7Z3 1164 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 SPG21Q9NZD8 308 aa16.97■□□□□ 0.31
C9orf3-217ENST00000479161 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-217ENST00000479161 NCK2O43639 380 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 FGF18O76093 207 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 BCAR1P56945 870 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-217ENST00000479161 KRT17Q04695 432 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 MCL1Q07820 350 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 TMEM132AQ24JP5 1023 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 XKR4Q5GH76 650 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 SPOUT1Q5T280 376 aaKnown RBP16.96■□□□□ 0.31
C9orf3-217ENST00000479161 EEF1DP3Q658K8 133 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 DYMQ7RTS9 669 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 SLC39A11Q8N1S5 342 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 DHX58Q96C10 678 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 TSPAN18Q96SJ8 248 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 GAD1Q99259 594 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 CDT1Q9H211 546 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 PUF60Q9UHX1 559 aaKnown RBP16.96■□□□□ 0.31
C9orf3-217ENST00000479161 HES2Q9Y543 173 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
C9orf3-217ENST00000479161 ATG2AQ2TAZ0 1938 aa16.96■□□□□ 0.3
C9orf3-217ENST00000479161 PVALEFA0A1B0GWK0 134 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 K7ENM7 598 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 GRM6O15303 877 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 CLDN3O15551 220 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 ALDH2P05091 517 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 GALTP07902 379 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 IBSPP21815 317 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 GRIK3Q13003 919 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 CAMK1Q14012 370 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 COL19A1Q14993 1142 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 ALKAL1Q6UXT8 129 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 CDR2LQ86X02 465 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 MRPS27Q92552 414 aaKnown RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 TOPORSQ9NS56 1045 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-217ENST00000479161 PANK4Q9NVE7 773 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 STYXL1Q9Y6J8 313 aa16.95■□□□□ 0.3
C9orf3-217ENST00000479161 REV3LO60673 3130 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 RECQL4O94761 1208 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 PFKFB1P16118 471 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 LIG1P18858 919 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 MLH1P40692 756 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 EHHADHQ08426 723 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
C9orf3-217ENST00000479161 HERC4Q5GLZ8 1057 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-217ENST00000479161 SLFN12LQ6IEE8 588 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 STXBP4Q6ZWJ1 553 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 SFR1Q86XK3 245 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 COLGALT2Q8IYK4 626 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 GPR65Q8IYL9 337 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 THNSL1Q8IYQ7 743 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 CEP57L1Q8IYX8 460 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 FAM193BQ96PV7 902 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-217ENST00000479161 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
C9orf3-217ENST00000479161 NSUN3Q9H649 340 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms