RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 PLOD2O00469 737 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 MPHOSPH10O00566 681 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 RGS13O14921 159 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 NDUFS2O75306 463 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SLC4A1P02730 911 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SNRPB2P08579 225 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 CCDC159P0C7I6 412 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ALOX15P16050 662 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 JUNBP17275 347 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ITGB5P18084 799 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 LSP1P33241 339 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SERPINF1P36955 418 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 IL12RB1P42701 662 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 PHKA1P46020 1223 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 MAPK7Q13164 816 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 TRPC3Q13507 836 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 EFR3AQ14156 821 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 PDCD1Q15116 288 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SMAD2Q15796 467 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 UAP1L1Q3KQV9 507 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SETMARQ53H47 684 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF362Q5T0B9 420 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 CYFIP1Q7L576 1253 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 OVCH1Q7RTY7 1134 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 NLRP14Q86W24 1093 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 CCAR2Q8N163 923 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 FNIP1Q8TF40 1166 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 BCL7CQ8WUZ0 217 aaPredicted RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 COA7Q96BR5 231 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 NSUN4Q96CB9 384 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 MISP3Q96FF7 219 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ASIC4Q96FT7 647 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 CGRRF1Q99675 332 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 SLX1AQ9BQ83 275 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 AGXT2Q9BYV1 514 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 C22orf23Q9BZE7 217 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
RC3H1-204ENST00000479099 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF451Q9Y4E5 1061 aa6.56□□□□□ -1.36
RC3H1-204ENST00000479099 ABCC9O60706 1549 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 DDX3XO00571 662 aaKnown RBP eCLIP6.55□□□□□ -1.36
RC3H1-204ENST00000479099 NPC1O15118 1278 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 UBOX5O94941 541 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 FSBPO95073 299 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 TGDSO95455 350 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 FAM87AP0C7U9 286 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 THEGLP0DJG4 465 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ATP5DP30049 168 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ABCD1P33897 745 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 SEPHS1P49903 392 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 CLCN2P51788 898 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 VAMP2P63027 116 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 CDK5R2Q13319 367 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ARHGAP44Q17R89 818 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 SLC35G1Q2M3R5 365 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 C5orf22Q49AR2 442 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 KRTCAP3Q53RY4 240 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 HSP90AB3PQ58FF7 597 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 KLHL10Q6JEL2 608 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 MOGAT3Q86VF5 341 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 LIX1LQ8IVB5 337 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ZNF610Q8N9Z0 462 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 AVL9Q8NBF6 648 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 TOR1AIP2Q8NFQ8 470 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 SPATA18Q8TC71 538 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 SPPL3Q8TCT6 385 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 GPBAR1Q8TDU6 330 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 TGFBRAP1Q8WUH2 860 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 STON2Q8WXE9 905 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 BRF1Q92994 677 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
RC3H1-204ENST00000479099 UNKQ9C0B0 810 aaKnown RBP6.55□□□□□ -1.36
RC3H1-204ENST00000479099 ZDHHC5Q9C0B5 715 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 OBP2BQ9NPH6 170 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 KIF17Q9P2E2 1029 aa6.55□□□□□ -1.36
RC3H1-204ENST00000479099 CGGBP1Q9UFW8 167 aaPredicted RBP6.55□□□□□ -1.36
RC3H1-204ENST00000479099 MTF2Q9Y483 593 aaPredicted RBP6.55□□□□□ -1.36
RC3H1-204ENST00000479099 PASKQ96RG2 1323 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 H0Y626 953 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 APOL1O14791 398 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CLEC3AO75596 197 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 TMEM63AO94886 807 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 RTN3O95197 1032 aaPredicted RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 KCNH1O95259 989 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 HARSP12081 509 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 KRT10P13645 584 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CD247P20963 164 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 HNF4AP41235 474 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 POLD2P49005 469 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CSE1LP55060 971 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 CASP6P55212 293 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 EVCP57679 992 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 RNASE9P60153 205 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 GPR85P60893 370 aa6.54□□□□□ -1.36
RC3H1-204ENST00000479099 SMAD3P84022 425 aaKnown RBP6.54□□□□□ -1.36
RC3H1-204ENST00000479099 SRSF2Q01130 221 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms