RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 KDF1Q8NAX2 398 aaPredicted RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 SMG7Q92540 1137 aaKnown RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 PPP1R16BQ96T49 567 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 LTB4R2Q9NPC1 389 aa16.16■□□□□ 0.18
USP11-207ENST00000478596 ZFP37Q9Y6Q3 630 aaPredicted RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 CNOT1A5YKK6 2376 aaKnown RBP16.16■□□□□ 0.18
USP11-207ENST00000478596 TDP2O95551 362 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 C22orf31O95567 290 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 VTNP04004 478 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
USP11-207ENST00000478596 KCNA4P22459 653 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 EIF4BP23588 611 aaKnown RBP16.15■□□□□ 0.18
USP11-207ENST00000478596 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
USP11-207ENST00000478596 PRR16Q569H4 304 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 ZBTB41Q5SVQ8 909 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 NELL2Q99435 816 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 NRDE2Q9H7Z3 1164 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 MRPL17Q9NRX2 175 aaKnown RBP16.15■□□□□ 0.18
USP11-207ENST00000478596 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
USP11-207ENST00000478596 NFASCO94856 1347 aa16.15■□□□□ 0.18
USP11-207ENST00000478596 GDF9O60383 454 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 NEMFO60524 1076 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 RFPL2O75678 378 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 TDGF1P13385 188 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 LIMK1P53667 647 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 NRLP54845 237 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
USP11-207ENST00000478596 NBR1Q14596 966 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 PLA2G4DQ86XP0 818 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 HDAC7Q8WUI4 952 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 RPP25Q9BUL9 199 aaKnown RBP16.14■□□□□ 0.17
USP11-207ENST00000478596 KCNH7Q9NS40 1196 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 TBC1D13Q9NVG8 400 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 CEP131Q9UPN4 1083 aa16.14■□□□□ 0.17
USP11-207ENST00000478596 MIA3Q5JRA6 1907 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 TM4SF5O14894 197 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 NCAM2O15394 837 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 ADH1AP07327 375 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 DDIT3P35638 169 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 USP11P51784 963 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 PFKPQ01813 784 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 ZNF174Q15697 407 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 LPAL2Q16609 132 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 UNQ6494/PRO21346Q6UXR6 183 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 GET4Q7L5D6 327 aaPredicted RBP16.13■□□□□ 0.17
USP11-207ENST00000478596 FGF14Q92915 247 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 SDF4Q9BRK5 362 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 ADAMTS10Q9H324 1103 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 DOCK8Q8NF50 2099 aa16.13■□□□□ 0.17
USP11-207ENST00000478596 FLNBO75369 2602 aaKnown RBP16.13■□□□□ 0.17
USP11-207ENST00000478596 GCN1Q92616 2671 aaKnown RBP16.12■□□□□ 0.17
USP11-207ENST00000478596 C1QTNF9BB2RNN3 333 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 GLUD1P00367 558 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 C1RP00736 705 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 CYP3A4P08684 503 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 C1QTNF9P0C862 333 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 SLC11A1P49279 550 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 KRT85P78386 507 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 STK38Q15208 465 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 CALCRLQ16602 461 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 CEP55Q53EZ4 464 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 PARM1Q6UWI2 310 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 NT5C3AQ9H0P0 336 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 IGF2RP11717 2491 aa16.12■□□□□ 0.17
USP11-207ENST00000478596 COL4A3Q01955 1670 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 TEX28O15482 410 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
USP11-207ENST00000478596 BMP15O95972 392 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
USP11-207ENST00000478596 CD72P21854 359 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 TARSP26639 723 aaKnown RBP16.11■□□□□ 0.17
USP11-207ENST00000478596 NLRP11P59045 1033 aaKnown RBP16.11■□□□□ 0.17
USP11-207ENST00000478596 MTAPQ13126 283 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 ORC2Q13416 577 aaPredicted RBP16.11■□□□□ 0.17
USP11-207ENST00000478596 FZD5Q13467 585 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 NOMO2Q5JPE7 1267 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 GLB1LQ6UWU2 654 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 ST13P5Q8NFI4 369 aaPredicted RBP16.11■□□□□ 0.17
USP11-207ENST00000478596 RPS6KC1Q96S38 1066 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 PLEKHA4Q9H4M7 779 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 PIDD1Q9HB75 910 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 ZDHHC7Q9NXF8 308 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 DNAJB4Q9UDY4 337 aa16.11■□□□□ 0.17
USP11-207ENST00000478596 SSX2IPQ9Y2D8 614 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms