RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ACKR2O00590 384 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 SOD2P04179 222 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 SSBP05455 408 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL7A1-209ENST00000474432 CA8P35219 290 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 OR1G1P47890 313 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 ATP2C1P98194 919 aaPredicted RBP20.52■□□□□ 0.88
COL7A1-209ENST00000474432 BMS1Q14692 1282 aaKnown RBP20.52■□□□□ 0.88
COL7A1-209ENST00000474432 ZBTB8OSQ8IWT0 167 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 HERC2P3Q9BVR0 1158 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 C2orf40Q9H1Z8 148 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 POMKQ9H5K3 350 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 ZNF318Q5VUA4 2279 aa20.52■□□□□ 0.88
COL7A1-209ENST00000474432 PRKCBP05771 671 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 WEE2P0C1S8 567 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 CLCN4P51793 760 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 MAPK7Q13164 816 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 TPRNQ4KMQ1 711 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 KIAA0319Q5VV43 1072 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 EDAQ92838 391 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 CACNG4Q9UBN1 327 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 STK39Q9UEW8 545 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 DENND4AQ7Z401 1863 aa20.51■□□□□ 0.87
COL7A1-209ENST00000474432 MYO10Q9HD67 2058 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 TRIP11Q15643 1979 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 PTGESO14684 152 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 ITIH3Q06033 890 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 PRPF4BQ13523 1007 aaKnown RBP20.5■□□□□ 0.87
COL7A1-209ENST00000474432 NAB2Q15742 525 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 MAPK6Q16659 721 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 RILPL1Q5EBL4 403 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 RARS2Q5T160 578 aaKnown RBP20.5■□□□□ 0.87
COL7A1-209ENST00000474432 NT5DC1Q5TFE4 455 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 DTHD1Q6ZMT9 781 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 DEPTORQ8TB45 409 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 RABGGTAQ92696 567 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 PNMA5Q96PV4 448 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 PAAF1Q9BRP4 392 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 RUSC1Q9BVN2 902 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 CHST7Q9NS84 486 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 DZANK1Q9NVP4 752 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 PARP2Q9UGN5 583 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 KIF3AQ9Y496 699 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 STK24Q9Y6E0 443 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 C2orf16Q68DN1 1984 aa20.5■□□□□ 0.87
COL7A1-209ENST00000474432 MUC6Q6W4X9 2439 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 N4BP3O15049 544 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 MCM2P49736 904 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 GRIK3Q13003 919 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 PPP2R5AQ15172 486 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 HYIQ5T013 277 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 HFE2Q6ZVN8 426 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 C1orf186Q6ZWK4 172 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 HACE1Q8IYU2 909 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 RPS6KC1Q96S38 1066 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 RAB34Q9BZG1 259 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 GPR62Q9BZJ7 368 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 RXFP1Q9HBX9 757 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 MRPL17Q9NRX2 175 aaKnown RBP20.49■□□□□ 0.87
COL7A1-209ENST00000474432 SNTG2Q9NY99 539 aa20.49■□□□□ 0.87
COL7A1-209ENST00000474432 ARIH1Q9Y4X5 557 aaPredicted RBP20.49■□□□□ 0.87
COL7A1-209ENST00000474432 ZXDAP98168 799 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 DSG1Q02413 1049 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 KRT79Q5XKE5 535 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 RINT1Q6NUQ1 792 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 TAS1R3Q7RTX0 852 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 B3GALT6Q96L58 329 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 FBXL18Q96ME1 805 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
COL7A1-209ENST00000474432 DNM3Q9UQ16 869 aa20.48■□□□□ 0.87
COL7A1-209ENST00000474432 C2CD2LO14523 706 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 TEX28O15482 410 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 RECQL4O94761 1208 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 LIG1P18858 919 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 SP100P23497 879 aaPredicted RBP20.47■□□□□ 0.87
COL7A1-209ENST00000474432 KLRC2P26717 231 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 NPTX2P47972 431 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 EFNA5P52803 228 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 KIAA1841Q6NSI8 718 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 CES5AQ6NT32 575 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 FUT10Q6P4F1 479 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 IFT74Q96LB3 600 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 NECTIN4Q96NY8 510 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 EMILIN2Q9BXX0 1053 aa20.47■□□□□ 0.87
COL7A1-209ENST00000474432 MTCL1Q9Y4B5 1905 aaKnown RBP20.47■□□□□ 0.87
COL7A1-209ENST00000474432 C2CD4DB7Z1M9 353 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 HIP1RO75146 1068 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 URODP06132 367 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 IGFBP6P24592 240 aaPredicted RBP20.46■□□□□ 0.87
COL7A1-209ENST00000474432 PLA2G5P39877 138 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 MTHFRP42898 656 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 GLUD2P49448 558 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 PEX3P56589 373 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 TUSC3Q13454 348 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 TMC5Q6UXY8 1006 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 TRIM67Q6ZTA4 783 aa20.46■□□□□ 0.87
COL7A1-209ENST00000474432 TMEM87AQ8NBN3 555 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms