RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 SYCP3Q8IZU3 236 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 ZNF507Q8TCN5 953 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 SCFD1Q8WVM8 642 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 SMARCE1Q969G3 411 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 YME1L1Q96TA2 773 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 CDT1Q9H211 546 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 MSRAQ9UJ68 235 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 EXOC7Q9UPT5 735 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 LCHNA4D1U4 455 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 TISP43B9A030 160 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 EIF3DO15371 548 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNRPB-203ENST00000474384 CLDN3O15551 220 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 HARSP12081 509 aaKnown RBP19.85■□□□□ 0.77
SNRPB-203ENST00000474384 AKAP5P24588 427 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 HOXD13P35453 343 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 RAB30Q15771 203 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 CLLU1OSQ5K130 101 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 AGMOQ6ZNB7 445 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 APBB1IPQ7Z5R6 666 aaPredicted RBP19.85■□□□□ 0.77
SNRPB-203ENST00000474384 KIAA0895Q8NCT3 520 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 HELQQ8TDG4 1101 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 ZNF689Q96CS4 500 aaPredicted RBP19.85■□□□□ 0.77
SNRPB-203ENST00000474384 HAPLN2Q9GZV7 340 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 TMEM206Q9H813 350 aa19.85■□□□□ 0.77
SNRPB-203ENST00000474384 RC3H2Q9HBD1 1191 aaKnown RBP19.85■□□□□ 0.77
SNRPB-203ENST00000474384 TBKBP1A7MCY6 615 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 HOXA2O43364 376 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 MCF2P10911 925 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 PAN2Q504Q3 1202 aaKnown RBP19.84■□□□□ 0.77
SNRPB-203ENST00000474384 NELFCDQ8IXH7 590 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 HACE1Q8IYU2 909 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 SPATA20Q8TB22 786 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 CASD1Q96PB1 797 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 GSDMAQ96QA5 445 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 NKX2-4Q9H2Z4 354 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 RMND1Q9NWS8 449 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 SNTG2Q9NY99 539 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 PARP2Q9UGN5 583 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 CHD9Q3L8U1 2897 aa19.84■□□□□ 0.77
SNRPB-203ENST00000474384 CA3P07451 260 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 DNAJB2P25686 324 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 OSTNP61366 133 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 MCL1Q07820 350 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 BTG3Q14201 252 aaPredicted RBP19.83■□□□□ 0.77
SNRPB-203ENST00000474384 NOLC1Q14978 699 aaKnown RBP eCLIP19.83■□□□□ 0.774e-9■■■■■ 27
SNRPB-203ENST00000474384 SEZ6Q53EL9 994 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 THNSL1Q8IYQ7 743 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 ABI1Q8IZP0 508 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 CEP120Q8N960 986 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 TMEM117Q9H0C3 514 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 CLSTN2Q9H4D0 955 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 RSAD1Q9HA92 442 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 GDAQ9Y2T3 454 aa19.83■□□□□ 0.77
SNRPB-203ENST00000474384 COL4A6Q14031 1691 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 OFD1O75665 1012 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 ARHGEF15O94989 841 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 BMT2Q1RMZ1 405 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 ISM2Q6H9L7 571 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 SLFN12LQ6IEE8 588 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 GLB1LQ6UWU2 654 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 SP7Q8TDD2 431 aaPredicted RBP19.82■□□□□ 0.76
SNRPB-203ENST00000474384 TIFAQ96CG3 184 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 LRCH3Q96II8 777 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 MSTO1Q9BUK6 570 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 UBN1Q9NPG3 1134 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 KLK14Q9P0G3 267 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 MAPK8IP1Q9UQF2 711 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 INPP5FQ9Y2H2 1132 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 STYXL1Q9Y6J8 313 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 ZMYM2Q9UBW7 1377 aa19.82■□□□□ 0.76
SNRPB-203ENST00000474384 FNDC1Q4ZHG4 1894 aaPredicted RBP19.82■□□□□ 0.76
SNRPB-203ENST00000474384 UBE4BO95155 1302 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 A0A0B4J269 797 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 ADSSP30520 456 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 GRM5P41594 1212 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 AFF1P51825 1210 aaKnown RBP19.81■□□□□ 0.76
SNRPB-203ENST00000474384 TMEM192Q8IY95 271 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 SMYD4Q8IYR2 804 aaPredicted RBP19.81■□□□□ 0.76
SNRPB-203ENST00000474384 CMTR2Q8IYT2 770 aaKnown RBP19.81■□□□□ 0.76
SNRPB-203ENST00000474384 FIBCD1Q8N539 461 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 ZFP42Q96MM3 310 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 GAD1Q99259 594 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 GBP3Q9H0R5 595 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 NUP62CLQ9H1M0 184 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 MAN1B1Q9UKM7 699 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 GIT1Q9Y2X7 761 aa19.81■□□□□ 0.76
SNRPB-203ENST00000474384 LINC01553A4QN01 128 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 ARL5CA6NH57 179 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 TGFB1I1O43294 461 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 RECQL4O94761 1208 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 MBD3O95983 291 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 MLH1P40692 756 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 KNOP1Q1ED39 458 aaKnown RBP19.8■□□□□ 0.76
SNRPB-203ENST00000474384 NOMO2Q5JPE7 1267 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 ZNF658Q5TYW1 1059 aaPredicted RBP19.8■□□□□ 0.76
SNRPB-203ENST00000474384 LRRC55Q6ZSA7 311 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 POMGNT1Q8WZA1 660 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 ACAP3Q96P50 834 aa19.8■□□□□ 0.76
SNRPB-203ENST00000474384 CCDC94Q9BW85 323 aaPredicted RBP19.8■□□□□ 0.76
SNRPB-203ENST00000474384 SLC28A3Q9HAS3 691 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms