RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TAS1R3Q7RTX0 852 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 ZC3H3Q8IXZ2 948 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 CAGE1Q8TC20 777 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 IQCDQ96DY2 449 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 MED15Q96RN5 788 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 CCDC94Q9BW85 323 aaPredicted RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 ADAMTS10Q9H324 1103 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 RBAKQ9NYW8 714 aaPredicted RBP11.18□□□□□ -0.62
PRPF38A-202ENST00000474048 TISP43B9A030 160 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 TSPAN1O60635 241 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 PQBP1O60828 265 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 GPR32O75388 356 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 DLATP10515 647 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 MCF2P10911 925 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 TRIM21P19474 475 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 GJA8P48165 433 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 CASP4P49662 377 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 GSDMDP57764 484 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 MCL1Q07820 350 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 RPAINQ86UA6 219 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 TRIM59Q8IWR1 403 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 THNSL1Q8IYQ7 743 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 ZNF397Q8NF99 534 aaPredicted RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 NEK11Q8NG66 645 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 TMEM174Q8WUU8 243 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 HSD3B7Q9H2F3 369 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 RPF1Q9H9Y2 349 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 DMAC2Q9NW81 257 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
PRPF38A-202ENST00000474048 A0A0B4J269 797 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 LRRC10BA6NIK2 292 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 B4GALT5O43286 388 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 B4GALT4O60513 344 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 PHACTR2O75167 634 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 CSDE1O75534 798 aaKnown RBP11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 IL18RAPO95256 599 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 NPTXRO95502 500 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 ARF4P18085 180 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 TNNI1P19237 187 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 ACOT2P49753 483 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 MYL7Q01449 175 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 GBP6Q6ZN66 633 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 NECAB2Q7Z6G3 386 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 IRF2BP1Q8IU81 584 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 IMPG2Q9BZV3 1241 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 TRPV6Q9H1D0 765 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 IKZF4Q9H2S9 585 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 PDZD7Q9H5P4 517 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 MINDY3Q9H8M7 445 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 STYXL1Q9Y6J8 313 aa11.16□□□□□ -0.62
PRPF38A-202ENST00000474048 GRIN2DO15399 1336 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 A0A1W2PQC6 194 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 TNNC2P02585 160 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CLTAP09496 248 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 SKIP12755 728 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 FGFR4P22455 802 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 MXI1P50539 228 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 AP3M2P53677 418 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 OSTNP61366 133 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 ENPEPQ07075 957 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CYP24A1Q07973 514 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 BIRC3Q13489 604 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 HIC1Q14526 733 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 NR1I3Q14994 352 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 SLC39A4Q6P5W5 647 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CBWD2Q8IUF1 395 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 VSTM4Q8IW00 320 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 SLC43A3Q8NBI5 491 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CACTINQ8WUQ7 758 aaKnown RBP11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 ANKRD36BP1Q96IX9 119 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 ZBTB45Q96K62 511 aaPredicted RBP11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 MCOLN1Q9GZU1 580 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CRISPLD2Q9H0B8 497 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 CDT1Q9H211 546 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 GCNT4Q9P109 453 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
PRPF38A-202ENST00000474048 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms