RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 TTLL13PA6NNM8 815 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 HNRNPDLO14979 420 aaKnown RBP15.57■□□□□ 0.08
BRCA1-211ENST00000472490 CLDN3O15551 220 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 NR1I2O75469 434 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 LINC00271P0C7V0 271 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 MCF2P10911 925 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 POU3F3P20264 500 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-211ENST00000472490 PPM1AP35813 382 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 LIG4P49917 911 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 ASIC1P78348 528 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 GPM6BQ13491 265 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 TAS1R3Q7RTX0 852 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 ZNF720Q7Z2F6 126 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 FSIP1Q8NA03 581 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 STAMQ92783 540 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 ZNF558Q96NG5 402 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 RPS6KC1Q96S38 1066 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 CCDC94Q9BW85 323 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-211ENST00000472490 APOL6Q9BWW8 343 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 PTPRHQ9HD43 1115 aa15.57■□□□□ 0.08
BRCA1-211ENST00000472490 TOPORSQ9NS56 1045 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-211ENST00000472490 PVALEFA0A1B0GWK0 134 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 ARL5CA6NH57 179 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 MEIS3P2A8K0S8 358 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 INPPL1O15357 1258 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 GCNT3O95395 438 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 PROZP22891 400 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 NMT1P30419 496 aaKnown RBP15.56■□□□□ 0.08
BRCA1-211ENST00000472490 MLH1P40692 756 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 MATR3P43243 847 aaKnown RBP eCLIP15.56■□□□□ 0.08
BRCA1-211ENST00000472490 NDUFA8P51970 172 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 YARSP54577 528 aaKnown RBP15.56■□□□□ 0.08
BRCA1-211ENST00000472490 KRT17Q04695 432 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 UBE3AQ05086 875 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 KYAT1Q16773 422 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 KANK3Q6NY19 840 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 KCNT2Q6UVM3 1135 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 LRRC55Q6ZSA7 311 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 SPRED2Q7Z698 418 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 MAP4K3Q8IVH8 894 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 THNSL1Q8IYQ7 743 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 COLGALT1Q8NBJ5 622 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 FIZ1Q96SL8 496 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 GAD1Q99259 594 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 CWH43Q9H720 699 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 TBC1D13Q9NVG8 400 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 STK39Q9UEW8 545 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 SERTAD1Q9UHV2 236 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 PUF60Q9UHX1 559 aaKnown RBP15.56■□□□□ 0.08
BRCA1-211ENST00000472490 USP20Q9Y2K6 914 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 PTPRSQ13332 1948 aa15.56■□□□□ 0.08
BRCA1-211ENST00000472490 EPOPA6NHQ4 379 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 RFXAPO00287 272 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 ACTN4O43707 911 aaKnown RBP15.55■□□□□ 0.08
BRCA1-211ENST00000472490 ZC3H11AO75152 810 aaKnown RBP eCLIP15.55■□□□□ 0.08
BRCA1-211ENST00000472490 PIGRP01833 764 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 ALDH2P05091 517 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 EDN1P05305 212 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 AKAP5P24588 427 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 GRM5P41594 1212 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 AFMP43652 599 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 MCL1Q07820 350 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 COASYQ13057 564 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
BRCA1-211ENST00000472490 EEF1DP3Q658K8 133 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 SLFN12LQ6IEE8 588 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 UNC13DQ70J99 1090 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 KLHL23Q8NBE8 558 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 GDPD5Q8WTR4 605 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 MRPL38Q96DV4 380 aaKnown RBP15.55■□□□□ 0.08
BRCA1-211ENST00000472490 PAGE5Q96GU1 130 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
BRCA1-211ENST00000472490 ACCSQ96QU6 501 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 CDT1Q9H211 546 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 TMEM206Q9H813 350 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 SNTG2Q9NY99 539 aa15.55■□□□□ 0.08
BRCA1-211ENST00000472490 FGF18O76093 207 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 RECQL4O94761 1208 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 SLC34A2O95436 690 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 POMCP01189 267 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 BCAR1P56945 870 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 PLCB3Q01970 1234 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 GRIK3Q13003 919 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 ADGRE1Q14246 886 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 BMS1Q14692 1282 aaKnown RBP15.54■□□□□ 0.08
BRCA1-211ENST00000472490 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 ZC2HC1CQ53FD0 456 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-211ENST00000472490 ZBTB33Q86T24 672 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 CCDC47Q96A33 483 aaKnown RBP15.54■□□□□ 0.08
BRCA1-211ENST00000472490 ACAP3Q96P50 834 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 TMEM175Q9BSA9 504 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 SPG21Q9NZD8 308 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 TBC1D7Q9P0N9 293 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
BRCA1-211ENST00000472490 PLAGL2Q9UPG8 496 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 LZTS1Q9Y250 596 aa15.54■□□□□ 0.08
BRCA1-211ENST00000472490 GDAQ9Y2T3 454 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms