RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PROZP22891 400 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
SDC3-203ENST00000471567 SYKP43405 635 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 GPM6BQ13491 265 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.28
SDC3-203ENST00000471567 MRPS27Q92552 414 aaKnown RBP16.77■□□□□ 0.28
SDC3-203ENST00000471567 STAMQ92783 540 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 HVCN1Q96D96 273 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 TBC1D13Q9NVG8 400 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 INPP5FQ9Y2H2 1132 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 NLRC5Q86WI3 1866 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 GOLGA6L4A6NEF3 574 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ARL5CA6NH57 179 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ABLIM1O14639 778 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ACTN4O43707 911 aaKnown RBP16.76■□□□□ 0.27
SDC3-203ENST00000471567 MCF2P10911 925 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 IGFBP4P22692 258 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 NDUFA8P51970 172 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ALCAMQ13740 583 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ZNF568Q3ZCX4 644 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 MPZL3Q6UWV2 235 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 COLGALT1Q8NBJ5 622 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 GDPD5Q8WTR4 605 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 ZNF558Q96NG5 402 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 GAD1Q99259 594 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 APOL6Q9BWW8 343 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 STRA6Q9BX79 667 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 LMAN2LQ9H0V9 348 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 CDT1Q9H211 546 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
SDC3-203ENST00000471567 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
SDC3-203ENST00000471567 PPP1R37O75864 691 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 MYL1P05976 194 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 AKAP5P24588 427 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 PPM1AP35813 382 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 GRM5P41594 1212 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 ASIC1P78348 528 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
SDC3-203ENST00000471567 PTPROQ16827 1216 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 KCNT2Q6UVM3 1135 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 MAP4K3Q8IVH8 894 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 KLHL23Q8NBE8 558 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 BICD1Q96G01 975 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 SNTG2Q9NY99 539 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 PLAGL2Q9UPG8 496 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 PCDHB13Q9Y5F0 798 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 MTCH2Q9Y6C9 303 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 CHD7Q9P2D1 2997 aa16.75■□□□□ 0.27
SDC3-203ENST00000471567 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 CLDN3O15551 220 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 MLH1P40692 756 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 AFMP43652 599 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 LIG4P49917 911 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 AFF1P51825 1210 aaKnown RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 UBE3AQ05086 875 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 MCL1Q07820 350 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 COASYQ13057 564 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 NOLC1Q14978 699 aaKnown RBP eCLIP16.74■□□□□ 0.27
SDC3-203ENST00000471567 ZC2HC1CQ53FD0 456 aaPredicted RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 STXBP4Q6ZWJ1 553 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 UNC13DQ70J99 1090 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 ZBTB33Q86T24 672 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 MRPL38Q96DV4 380 aaKnown RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 PAGE5Q96GU1 130 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 ZBTB45Q96K62 511 aaPredicted RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 FAM193BQ96PV7 902 aaPredicted RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
SDC3-203ENST00000471567 GOLPH3LQ9H4A5 285 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 NRDE2Q9H7Z3 1164 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 SPG21Q9NZD8 308 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 EXOC7Q9UPT5 735 aa16.74■□□□□ 0.27
SDC3-203ENST00000471567 RECQL4O94761 1208 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 ZNF202O95125 648 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 GCNT3O95395 438 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 POMCP01189 267 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 ITGB1P05556 798 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 BCAR1P56945 870 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 PLCB3Q01970 1234 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 KYAT1Q16773 422 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 THNSL1Q8IYQ7 743 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 GSTCDQ8NEC7 633 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 SPPL3Q8TCT6 385 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 ZFP42Q96MM3 310 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 ACCSQ96QU6 501 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 RPS6KC1Q96S38 1066 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 MIOSQ9NXC5 875 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 TBC1D7Q9P0N9 293 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 LZTS1Q9Y250 596 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 KIAA1671Q9BY89 1806 aa16.73■□□□□ 0.27
SDC3-203ENST00000471567 GRM6O15303 877 aa16.72■□□□□ 0.27
SDC3-203ENST00000471567 ZC3H11AO75152 810 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDC3-203ENST00000471567 FGF18O76093 207 aa16.72■□□□□ 0.27
SDC3-203ENST00000471567 DDHD2O94830 711 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms