RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 GATMP50440 423 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 PMS1P54277 932 aaKnown RBP16.18■□□□□ 0.18
COL9A3-209ENST00000469852 MCL1Q07820 350 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 LRIT3Q3SXY7 679 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 COBLL1Q53SF7 1204 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 FAM117BQ6P1L5 589 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 RNF169Q8NCN4 708 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
COL9A3-209ENST00000469852 CBWD1Q9BRT8 395 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 CXCL16Q9H2A7 254 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 TMEM206Q9H813 350 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 AGPAT3Q9NRZ7 376 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 STYXL1Q9Y6J8 313 aa16.18■□□□□ 0.18
COL9A3-209ENST00000469852 A0A0B4J269 797 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 CLIC2O15247 247 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 EFCAB14O75071 495 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 UPP2O95045 317 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 MCF2P10911 925 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 FGFR1P11362 822 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 KCNJ6P48051 423 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 OSTNP61366 133 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 NOLC1Q14978 699 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL9A3-209ENST00000469852 SKOR2Q2VWA4 1001 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-209ENST00000469852 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 MRPL10Q7Z7H8 261 aaKnown RBP16.17■□□□□ 0.18
COL9A3-209ENST00000469852 TRIML1Q8N9V2 468 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 TCHPQ9BT92 498 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 APOL6Q9BWW8 343 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 GBP3Q9H0R5 595 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 PCIF1Q9H4Z3 704 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 SNTG2Q9NY99 539 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 SLC4A7Q9Y6M7 1214 aa16.17■□□□□ 0.18
COL9A3-209ENST00000469852 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TRIM49BA6NDI0 452 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 GRXCR1A8MXD5 290 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 CLDN3O15551 220 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 ZNF623O75123 536 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 AMHP03971 560 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 AKAP5P24588 427 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TNFSF9P41273 254 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL9A3-209ENST00000469852 RAB27AP51159 221 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 NLRP12P59046 1061 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 DCAF4L1Q3SXM0 396 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 ZCWPW2Q504Y3 356 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 AGMOQ6ZNB7 445 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 NPAS4Q8IUM7 802 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 THNSL1Q8IYQ7 743 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TDHQ8IZJ6 230 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 POMGNT1Q8WZA1 660 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TOP1MTQ969P6 601 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 SAAL1Q96ER3 474 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 MSTO1Q9BUK6 570 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TYW1Q9NV66 732 aaKnown RBP16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TMEM161AQ9NX61 479 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 TRIP11Q15643 1979 aa16.16■□□□□ 0.18
COL9A3-209ENST00000469852 GOLGA8IPA6NC78 632 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 GOLGA8JA6NMD2 632 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 ANK1P16157 1881 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 AFF1P51825 1210 aaKnown RBP16.15■□□□□ 0.18
COL9A3-209ENST00000469852 CLLU1OSQ5K130 101 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 CRELD2Q6UXH1 353 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-209ENST00000469852 Q7L0L9 218 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
COL9A3-209ENST00000469852 MED15Q96RN5 788 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 ELAC1Q9H777 363 aaKnown RBP16.15■□□□□ 0.18
COL9A3-209ENST00000469852 AGO2Q9UKV8 859 aaKnown RBP16.15■□□□□ 0.18
COL9A3-209ENST00000469852 CTNND2Q9UQB3 1225 aa16.15■□□□□ 0.18
COL9A3-209ENST00000469852 RALGAPA2Q2PPJ7 1873 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 SYCE3A1L190 88 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 PDXKO00764 312 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 OGTO15294 1046 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 RECQL4O94761 1208 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 STAG3L1P0CL83 205 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 ITGA4P13612 1032 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
COL9A3-209ENST00000469852 GARTP22102 1010 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 GRM5P41594 1212 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 ACOT2P49753 483 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 CYP2J2P51589 502 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 WNT7BP56706 349 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 SLFN12LQ6IEE8 588 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 CENPPQ6IPU0 288 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 FAM43BQ6ZT52 329 aaPredicted RBP16.14■□□□□ 0.17
COL9A3-209ENST00000469852 HERC6Q8IVU3 1022 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 DEFB123Q8N688 67 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 HELQQ8TDG4 1101 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 ZFP42Q96MM3 310 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 SLC9A7Q96T83 725 aa16.14■□□□□ 0.17
COL9A3-209ENST00000469852 RC3H2Q9HBD1 1191 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms