RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 TRANK1O15050 2925 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 A0A1B0GVL5 298 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 ARL5CA6NH57 179 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 PFKFB1P16118 471 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 ALDH7A1P49419 539 aaKnown RBP21.96■■□□□ 1.11
NPHP4-206ENST00000468253 PLCB3Q01970 1234 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 KCNT2Q6UVM3 1135 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 CEP57L1Q8IYX8 460 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 KLHL23Q8NBE8 558 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 SPPL3Q8TCT6 385 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 HVCN1Q96D96 273 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 MRPL38Q96DV4 380 aaKnown RBP21.96■■□□□ 1.11
NPHP4-206ENST00000468253 ZNF558Q96NG5 402 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 TCHPQ9BT92 498 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 NXF3Q9H4D5 531 aaKnown RBP21.96■■□□□ 1.11
NPHP4-206ENST00000468253 PCDHB13Q9Y5F0 798 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 GBF1Q92538 1859 aa21.96■■□□□ 1.11
NPHP4-206ENST00000468253 CDH23Q9H251 3354 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 ABLIM1O14639 778 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 ALDH2P05091 517 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 MYL1P05976 194 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 IDEP14735 1019 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 NMT1P30419 496 aaKnown RBP21.95■■□□□ 1.1
NPHP4-206ENST00000468253 PPM1AP35813 382 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 RNASELQ05823 741 aaKnown RBP21.95■■□□□ 1.1
NPHP4-206ENST00000468253 ALCAMQ13740 583 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 MPZL3Q6UWV2 235 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 SFR1Q86XK3 245 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 GAD1Q99259 594 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 PARP2Q9UGN5 583 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 LZTS1Q9Y250 596 aa21.95■■□□□ 1.1
NPHP4-206ENST00000468253 PVALEFA0A1B0GWK0 134 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 K7ENM7 598 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 CLDN3O15551 220 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 ACTN4O43707 911 aaKnown RBP21.94■■□□□ 1.1
NPHP4-206ENST00000468253 ITGB1P05556 798 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 AKAP5P24588 427 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 GRM5P41594 1212 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 SYKP43405 635 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 MCL1Q07820 350 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 KYAT1Q16773 422 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 MAP4K3Q8IVH8 894 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 GSTCDQ8NEC7 633 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 GDPD5Q8WTR4 605 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 STAMQ92783 540 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 TMEM175Q9BSA9 504 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 NRDE2Q9H7Z3 1164 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 MRPL44Q9H9J2 332 aaKnown RBP21.94■■□□□ 1.1
NPHP4-206ENST00000468253 GDPD2Q9HCC8 539 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 SNTG2Q9NY99 539 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 SPG21Q9NZD8 308 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 SERTAD1Q9UHV2 236 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 INPP5FQ9Y2H2 1132 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 MYH15Q9Y2K3 1946 aa21.94■■□□□ 1.1
NPHP4-206ENST00000468253 PPP1R37O75864 691 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 GALTP07902 379 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 AFF1P51825 1210 aaKnown RBP21.93■■□□□ 1.1
NPHP4-206ENST00000468253 NDUFA8P51970 172 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 BCAR1P56945 870 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 KRT17Q04695 432 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 MAFAQ8NHW3 353 aaPredicted RBP21.93■■□□□ 1.1
NPHP4-206ENST00000468253 MRPS27Q92552 414 aaKnown RBP21.93■■□□□ 1.1
NPHP4-206ENST00000468253 PAGE5Q96GU1 130 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 FAM193BQ96PV7 902 aaPredicted RBP21.93■■□□□ 1.1
NPHP4-206ENST00000468253 APOL6Q9BWW8 343 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 CDT1Q9H211 546 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 MIOSQ9NXC5 875 aa21.93■■□□□ 1.1
NPHP4-206ENST00000468253 PUF60Q9UHX1 559 aaKnown RBP21.93■■□□□ 1.1
NPHP4-206ENST00000468253 GOLGA6L4A6NEF3 574 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 GRM6O15303 877 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 FGF18O76093 207 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 ZNF568Q3ZCX4 644 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 XKR4Q5GH76 650 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 SLFN12LQ6IEE8 588 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 PDE12Q6L8Q7 609 aaKnown RBP21.92■■□□□ 1.1
NPHP4-206ENST00000468253 ALKAL1Q6UXT8 129 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 UNC13DQ70J99 1090 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 ZNF280BQ86YH2 543 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 THNSL1Q8IYQ7 743 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 SLC39A11Q8N1S5 342 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 FSIP1Q8NA03 581 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 ZBTB45Q96K62 511 aaPredicted RBP21.92■■□□□ 1.1
NPHP4-206ENST00000468253 CCDC94Q9BW85 323 aaPredicted RBP21.92■■□□□ 1.1
NPHP4-206ENST00000468253 HCSTQ9UBK5 93 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 STK39Q9UEW8 545 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 EXOC7Q9UPT5 735 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 STYXL1Q9Y6J8 313 aa21.92■■□□□ 1.1
NPHP4-206ENST00000468253 RECQL4O94761 1208 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 DDHD2O94830 711 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 POMCP01189 267 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 MLH1P40692 756 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 LIG4P49917 911 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 ASIC1P78348 528 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 DSC1Q08554 894 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 ZC2HC1CQ53FD0 456 aaPredicted RBP21.91■■□□□ 1.1
NPHP4-206ENST00000468253 STXBP4Q6ZWJ1 553 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 COLGALT2Q8IYK4 626 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 BICD1Q96G01 975 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 ZFP42Q96MM3 310 aa21.91■■□□□ 1.1
NPHP4-206ENST00000468253 ACAP3Q96P50 834 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms