RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.22□□□□□ -0.29
PLOD3-211ENST00000466881 COL1A2P08123 1366 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 K7ERI5 159 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 ADCY3O60266 1144 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 EXOC3O60645 756 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 CYBAP13498 195 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 PSMC2P35998 433 aaKnown RBP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 DRP2Q13474 957 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 TFDP1Q14186 410 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 MXD4Q14582 209 aaPredicted RBP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 GRIK4Q16099 956 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 FSCN1Q16658 493 aaKnown RBP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 ZC3H3Q8IXZ2 948 aaKnown RBP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 ZBTB10Q96DT7 871 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
PLOD3-211ENST00000466881 METTL14Q9HCE5 456 aaKnown RBP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.297e-8■■■■□ 20.5
PLOD3-211ENST00000466881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
PLOD3-211ENST00000466881 RRN3P2A6NIE6 340 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 TISP43B9A030 160 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SIAH2O43255 324 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 AKAP3O75969 853 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 IGHA2P01877 340 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 RARBP10826 455 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 HOXD8P13378 290 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SCP2P22307 547 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 VARSP26640 1264 aaKnown RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 TMOD1P28289 359 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CASP4P49662 377 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 LIG4P49917 911 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CLCN3P51790 818 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SNRPFP62306 86 aaKnown RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CAP1Q01518 475 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CAPSQ13938 189 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 ARID5BQ14865 1188 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 NFIL3Q16649 462 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 DCAF17Q5H9S7 520 aaPredicted RBP13.2□□□□□ -0.3
PLOD3-211ENST00000466881 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 MAP4K3Q8IVH8 894 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 PCDHB9Q9Y5E1 797 aa13.2□□□□□ -0.3
PLOD3-211ENST00000466881 ADGRA3Q8IWK6 1321 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
PLOD3-211ENST00000466881 ASAP2O43150 1006 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 NRDCO43847 1150 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 ZEB2O60315 1214 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 KPNA6O60684 536 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 C22orf31O95567 290 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 GNRH1P01148 92 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 KRT13P13646 458 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 MSNP26038 577 aaKnown RBP13.19□□□□□ -0.3
PLOD3-211ENST00000466881 EFNA5P52803 228 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 MYBPC2Q14324 1141 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 SYCP1Q15431 976 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 MIIPQ5JXC2 388 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 MTHFD1LQ6UB35 978 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 TRIM59Q8IWR1 403 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 PPP1R13LQ8WUF5 828 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
PLOD3-211ENST00000466881 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 ZNF668Q96K58 619 aaPredicted RBP13.19□□□□□ -0.3
PLOD3-211ENST00000466881 SCLT1Q96NL6 688 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 UCN2Q96RP3 112 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
PLOD3-211ENST00000466881 TRIOBPQ9H2D6 2365 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
PLOD3-211ENST00000466881 SEPT4O43236 478 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 PGK1P00558 417 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 HMGCRP04035 888 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 GJB1P08034 283 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
PLOD3-211ENST00000466881 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms