RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 MRPL38Q96DV4 380 aaKnown RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 ADPGKQ9BRR6 497 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 TRIM6Q9C030 488 aaPredicted RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 LRRC27Q9C0I9 530 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 OLFML3Q9NRN5 406 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 LZTS1Q9Y250 596 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 USP20Q9Y2K6 914 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 PCDHB12Q9Y5F1 795 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 TRIP11Q15643 1979 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 ARL5CA6NH57 179 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 GRM6O15303 877 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 ACTN4O43707 911 aaKnown RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 B4GALT3O60512 393 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 TOM1L1O75674 476 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 KRT18P05783 430 aaKnown RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 MCF2P10911 925 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 PPM1AP35813 382 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 GRM5P41594 1212 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 AFF1P51825 1210 aaKnown RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 AMPD3Q01432 767 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 EHHADHQ08426 723 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 DSC1Q08554 894 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 STRN3Q13033 797 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 COL19A1Q14993 1142 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 PTPROQ16827 1216 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 XKR4Q5GH76 650 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 KCNT2Q6UVM3 1135 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 ZNF720Q7Z2F6 126 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 APBB1IPQ7Z5R6 666 aaPredicted RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 MAP4K3Q8IVH8 894 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 FAM178BQ8IXR5 827 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 SLC39A11Q8N1S5 342 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 URGCPQ8TCY9 931 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 DHX58Q96C10 678 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 HVCN1Q96D96 273 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 GAD1Q99259 594 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 TMEM175Q9BSA9 504 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 TARS2Q9BW92 718 aaKnown RBP10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 TRIM9Q9C026 710 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 CDT1Q9H211 546 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 NRDE2Q9H7Z3 1164 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 MIOSQ9NXC5 875 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 TBX20Q9UMR3 447 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 HES2Q9Y543 173 aa10.4□□□□□ -0.74
SDCCAG3-208ENST00000466579 CITO14578 2027 aa10.4□□□□□ -0.75
SDCCAG3-208ENST00000466579 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 K7ENM7 598 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 FSCN2O14926 492 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 FGF18O76093 207 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 EFEMP2O95967 443 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 GALTP07902 379 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 SLFN14P0C7P3 912 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 PFKFB1P16118 471 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 IGFBP4P22692 258 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 DNAJB1P25685 340 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 NMT1P30419 496 aaKnown RBP10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 BCAR1P56945 870 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 MCL1Q07820 350 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 NAB2Q15742 525 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 LONRF3Q496Y0 759 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 ALKAL1Q6UXT8 129 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 SFR1Q86XK3 245 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 ZNF280BQ86YH2 543 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 COLGALT2Q8IYK4 626 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 SNTG2Q9NY99 539 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 SPG21Q9NZD8 308 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 STYXL1Q9Y6J8 313 aa10.39□□□□□ -0.75
SDCCAG3-208ENST00000466579 MYO7AQ13402 2215 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 A0A1B0GVL5 298 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 PTGESO14684 152 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 FAM189A1O60320 539 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 RECQL4O94761 1208 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 DDHD2O94830 711 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 MYL1P05976 194 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 LIG1P18858 919 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 AKAP5P24588 427 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 ANP32AP39687 249 aaKnown RBP10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 MLH1P40692 756 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 GRIK3Q13003 919 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 ALCAMQ13740 583 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 NOLC1Q14978 699 aaKnown RBP eCLIP10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 ZNF568Q3ZCX4 644 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 TIGD5Q53EQ6 642 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 SPOUT1Q5T280 376 aaKnown RBP10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 PDE12Q6L8Q7 609 aaKnown RBP10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 SLC39A4Q6P5W5 647 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 POF1BQ8WVV4 589 aa10.38□□□□□ -0.75
SDCCAG3-208ENST00000466579 MRPS27Q92552 414 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms