RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 SAFB2Q14151 953 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC00879-204ENST00000466560 SEPT2Q15019 361 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 CDSNQ15517 529 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 GAGE13Q4V321 117 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 TCTN3Q6NUS6 607 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 Q6ZVL8 140 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 PALM2Q8IXS6 379 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 AGO3Q9H9G7 860 aaKnown RBP5.89□□□□□ -1.47
LINC00879-204ENST00000466560 SAP30BPQ9UHR5 308 aaKnown RBP5.89□□□□□ -1.47
LINC00879-204ENST00000466560 TSC22D4Q9Y3Q8 395 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 TCAF1Q9Y4C2 921 aa5.89□□□□□ -1.47
LINC00879-204ENST00000466560 MATN3O15232 486 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 MTSS1O43312 755 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 PRPF3O43395 683 aaKnown RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 SLC26A4O43511 780 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 FOXS1O43638 330 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 CDC14BO60729 498 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 POU2F2P09086 479 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 CR2P20023 1033 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 CASRP41180 1078 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 WASP42768 502 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 SELENOPP49908 381 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 WNT3AP56704 352 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 MGAT2Q10469 447 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 RIN1Q13671 783 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 C3orf36Q3SXR2 165 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 ADGRE4PQ86SQ3 457 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 TAX1BP1Q86VP1 789 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 WDR75Q8IWA0 830 aaKnown RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 CMTM4Q8IZR5 234 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 LILRA3Q8N6C8 439 aaPredicted RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 SHCBP1Q8NEM2 672 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 OR5M3Q8NGP4 307 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 Q8TCH9 128 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 ZNF480Q8WV37 535 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 CDK5RAP1Q96SZ6 601 aaKnown RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
LINC00879-204ENST00000466560 GPRC5DQ9NZD1 345 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 RCAN3Q9UKA8 241 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 OAZ3Q9UMX2 235 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 IPPQ9Y573 584 aa5.88□□□□□ -1.47
LINC00879-204ENST00000466560 UBE2QL1A1L167 161 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 FAM171A2A8MVW0 826 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 TNFRSF1AP19438 455 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 PDCP20941 246 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 AKAP5P24588 427 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 ECHS1P30084 290 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 CYP2C19P33261 490 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 PER3P56645 1201 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 DUSP2Q05923 314 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 IL10RAQ13651 578 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 MST1LQ2TV78 715 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 FAM102BQ5T8I3 360 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 MYO1HQ8N1T3 1032 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC00879-204ENST00000466560 SH3RF3Q8TEJ3 882 aaPredicted RBP5.87□□□□□ -1.47
LINC00879-204ENST00000466560 HOXB13Q92826 284 aaPredicted RBP5.87□□□□□ -1.47
LINC00879-204ENST00000466560 HDAC10Q969S8 669 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 ZFR2Q9UPR6 939 aaKnown RBP5.87□□□□□ -1.47
LINC00879-204ENST00000466560 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
LINC00879-204ENST00000466560 A0A1W2PRX2 142 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 MUSKO15146 869 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 ADCY6O43306 1168 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 ITGA10O75578 1167 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 GYPEP15421 78 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 SLC6A9P48067 706 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 NPEPPSP55786 919 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 MLC1Q15049 377 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 IFIT1BQ5T764 474 aaKnown RBP5.86□□□□□ -1.47
LINC00879-204ENST00000466560 SPRED1Q7Z699 444 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 RHOT1Q8IXI2 618 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 FUKQ8N0W3 1084 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 REPS2Q8NFH8 660 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 OR7D4Q8NG98 312 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 UHRF1Q96T88 793 aaPredicted RBP5.86□□□□□ -1.47
LINC00879-204ENST00000466560 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 GTPBP4Q9BZE4 634 aaKnown RBP5.86□□□□□ -1.47
LINC00879-204ENST00000466560 ENKD1Q9H0I2 346 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 BCO1Q9HAY6 547 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 IL23AQ9NPF7 189 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 TRPS1Q9UHF7 1281 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 SIK3Q9Y2K2 1263 aa5.86□□□□□ -1.47
LINC00879-204ENST00000466560 NRP1O14786 923 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 AP1G1O43747 822 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 ENDOD1O94919 500 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 GASTP01350 101 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 CRHR1P34998 444 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 SREBF1P36956 1147 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00879-204ENST00000466560 R3HDM1Q15032 1099 aaKnown RBP5.85□□□□□ -1.47
LINC00879-204ENST00000466560 HS1BP3Q53T59 392 aa5.85□□□□□ -1.47
LINC00879-204ENST00000466560 GJC2Q5T442 439 aaPredicted RBP5.85□□□□□ -1.47
LINC00879-204ENST00000466560 CXorf57Q6NSI4 855 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms