RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 VPS54Q9P1Q0 977 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 LHX6Q9UPM6 363 aa10.94□□□□□ -0.66
USP39-212ENST00000465514 FREM2Q5SZK8 3169 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 TEX28O15482 410 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 ZIC2O95409 532 aaPredicted RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 OATP04181 439 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 URODP06132 367 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 TMOD1P28289 359 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 USP11P51784 963 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 NRLP54845 237 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 PRKCEQ02156 737 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 UGCGQ16739 394 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 NOMO2Q5JPE7 1267 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 GLB1LQ6UWU2 654 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 CCDC148Q8NFR7 591 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 RNF26Q9BY78 433 aaPredicted RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 AGXT2Q9BYV1 514 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 DPP7Q9UHL4 492 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 TDRD15B5MCY1 1934 aaKnown RBP10.93□□□□□ -0.66
USP39-212ENST00000465514 TICRRQ7Z2Z1 1910 aa10.93□□□□□ -0.66
USP39-212ENST00000465514 COL4A2P08572 1712 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 PDCD11Q14690 1871 aaKnown RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 BPTFQ12830 3046 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 SRRM3A6NNA2 597 aaPredicted RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 MEIS3P2A8K0S8 358 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 TM4SF5O14894 197 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 NCAM2O15394 837 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 CHMP2AO43633 222 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 FOXD2O60548 495 aaPredicted RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 GAS7O60861 476 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 PAPLNO95428 1278 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 IFNAR1P17181 557 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 FSHRP23945 695 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 PHKA2P46019 1235 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 LIMK1P53667 647 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 PFKPQ01813 784 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 FZD5Q13467 585 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 SIM2Q14190 667 aaPredicted RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 AASDHQ4L235 1098 aaPredicted RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 LRCH2Q5VUJ6 765 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 ZNF280BQ86YH2 543 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 RSPH1Q8WYR4 309 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 SLC5A5Q92911 643 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 GJA10Q969M2 543 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 RIT2Q99578 217 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 KXD1Q9BQD3 176 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 NT5C3AQ9H0P0 336 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 UNC45AQ9H3U1 944 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 STK39Q9UEW8 545 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 ZFP37Q9Y6Q3 630 aaPredicted RBP10.92□□□□□ -0.66
USP39-212ENST00000465514 NAV2Q8IVL1 2488 aa10.92□□□□□ -0.66
USP39-212ENST00000465514 DARSP14868 501 aaKnown RBP10.91□□□□□ -0.66
USP39-212ENST00000465514 PSMA5P28066 241 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 SFNP31947 248 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 GPC3P51654 580 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 JAK3P52333 1124 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 NLRP5P59047 1200 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 SRSF5Q13243 272 aaKnown RBP10.91□□□□□ -0.66
USP39-212ENST00000465514 SF3A2Q15428 464 aaKnown RBP10.91□□□□□ -0.66
USP39-212ENST00000465514 MTSS1LQ765P7 747 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 TBCKQ8TEA7 893 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 SCLT1Q96NL6 688 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 TEKT3Q9BXF9 490 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 TMEM121BQ9BXQ6 578 aaPredicted RBP10.91□□□□□ -0.66
USP39-212ENST00000465514 PRKD2Q9BZL6 878 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 SH3GLB2Q9NR46 395 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 CDH7Q9ULB5 785 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 ADAMTS20P59510 1910 aa10.91□□□□□ -0.66
USP39-212ENST00000465514 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 CSDE1O75534 798 aaKnown RBP10.9□□□□□ -0.66
USP39-212ENST00000465514 PSMD10O75832 226 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 KCNK5O95279 499 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 SOD2P04179 222 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 SPINK2P20155 84 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 EVCP57679 992 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 ADCY1Q08828 1119 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.66
USP39-212ENST00000465514 DRP2Q13474 957 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 PPP2R5DQ14738 602 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 TARBP2Q15633 366 aaKnown RBP10.9□□□□□ -0.66
USP39-212ENST00000465514 Q4G0T1 1027 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 PSAPL1Q6NUJ1 521 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 ZNF852Q6ZMS4 543 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 TAS1R1Q7RTX1 841 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 MIER3Q7Z3K6 550 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 PALB2Q86YC2 1186 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 NELL2Q99435 816 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 HERC2P3Q9BVR0 1158 aa10.9□□□□□ -0.66
USP39-212ENST00000465514 NIFKQ9BYG3 293 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms