RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	MLF2	Q15773	248 aa	Predicted RBP	13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	USP41	Q3LFD5	358 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	FUT10	Q6P4F1	479 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	NOTUM	Q6P988	496 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	PARM1	Q6UWI2	310 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	EXOC8	Q8IYI6	725 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	RNF149	Q8NC42	400 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	ETNPPL	Q8TBG4	499 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	ZFP42	Q96MM3	310 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	RPP25	Q9BUL9	199 aa	Known RBP	13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	COLEC11	Q9BWP8	271 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	APOL6	Q9BWW8	343 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	DHX33	Q9H6R0	707 aa	Known RBP	13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	MIOS	Q9NXC5	875 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	FNIP2	Q9P278	1114 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	HES2	Q9Y543	173 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	PCDHGA2	Q9Y5H1	932 aa		13.43	□□□□□ -0.26
TRA2B-208	ENST00000465245	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	DKC1	O60832	514 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	ZMYND10	O75800	440 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CYP3A7	P24462	503 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	RFC5	P40937	340 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	PRKCQ	Q04759	706 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CSTF1	Q05048	431 aa	Known RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	LIN9	Q5TKA1	542 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	LILRA6	Q6PI73	481 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	MTSS1L	Q765P7	747 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	GPR161	Q8N6U8	529 aa	Known RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	ZNF579	Q8NAF0	562 aa	Known RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	ATRIP	Q8WXE1	791 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	SECISBP2L	Q93073	1101 aa	Known RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CCDC51	Q96ER9	411 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	BORCS6	Q96GS4	357 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CPB2	Q96IY4	423 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	MBOAT7	Q96N66	472 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	GPR62	Q9BZJ7	368 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	TRIM6	Q9C030	488 aa	Predicted RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	RNF39	Q9H2S5	420 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	SH3GLB2	Q9NR46	395 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	ADAM28	Q9UKQ2	775 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CDH7	Q9ULB5	785 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	PPME1	Q9Y570	386 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	MAP1B	P46821	2468 aa	Known RBP	13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	CFAP47	Q6ZTR5	3102 aa		13.42	□□□□□ -0.26
TRA2B-208	ENST00000465245	VWA8	A3KMH1	1905 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	NOTCH4	Q99466	2003 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	EML1	O00423	815 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	TSPAN1	O60635	241 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	IFNAR1	P17181	557 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	AXL	P30530	894 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	MAGEA9	P43362	315 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	NTHL1	P78549	312 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	NCBP1	Q09161	790 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	EMC2	Q15006	297 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	NTRK3	Q16288	839 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	GPR65	Q8IYL9	337 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	HACE1	Q8IYU2	909 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	TCP11	Q8WWU5	503 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	DDX23	Q9BUQ8	820 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	SLK	Q9H2G2	1235 aa	Predicted RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	NXF3	Q9H4D5	531 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	DDX25	Q9UHL0	483 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	FBXW11	Q9UKB1	542 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	CDV3	Q9UKY7	258 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	PCDHA4	Q9UN74	947 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	SMG5	Q9UPR3	1016 aa	Known RBP	13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	GIT1	Q9Y2X7	761 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	CHD8	Q9HCK8	2581 aa		13.41	□□□□□ -0.26
TRA2B-208	ENST00000465245	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.4	□□□□□ -0.26	5e-6	■■■■■ 39
TRA2B-208	ENST00000465245	FAM170B	A6NMN3	283 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	ASAP2	O43150	1006 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	SLC37A4	O43826	429 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	TADA2A	O75478	443 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	ATXN1	P54253	815 aa	Known RBP	13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	PFKP	Q01813	784 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	LMNB2	Q03252	620 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	PPP2R5C	Q13362	524 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	SLC44A4	Q53GD3	710 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	MOXD1	Q6UVY6	613 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	FERMT3	Q86UX7	667 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	BLID	Q8IZY5	108 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	RABGGTA	Q92696	567 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	FGF13	Q92913	245 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	OSBPL6	Q9BZF3	934 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	CSRNP2	Q9H175	543 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	EPC1	Q9H2F5	836 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	LTB4R2	Q9NPC1	389 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	ZSCAN32	Q9NX65	697 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	VAV3	Q9UKW4	847 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	POLI	Q9UNA4	740 aa		13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	MTF2	Q9Y483	593 aa	Predicted RBP	13.4	□□□□□ -0.26
TRA2B-208	ENST00000465245	PRR5-ARHGAP8	B1AHC4	643 aa		13.39	□□□□□ -0.27
TRA2B-208	ENST00000465245	INO80B-WBP1	J3KQ70	363 aa		13.39	□□□□□ -0.27
TRA2B-208	ENST00000465245	CCL16	O15467	120 aa		13.39	□□□□□ -0.27
TRA2B-208	ENST00000465245	P4HB	P07237	508 aa	Known RBP	13.39	□□□□□ -0.27
TRA2B-208	ENST00000465245	C8A	P07357	584 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms