RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 TMEM47Q9BQJ4 181 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 EMILIN2Q9BXX0 1053 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NUP62CLQ9H1M0 184 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ACBD3Q9H3P7 528 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 SPC25Q9HBM1 224 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TCP11L1Q9NUJ3 509 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 DDX19AQ9NUU7 478 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 CYP39A1Q9NYL5 469 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 PCDHGC5Q9Y5F6 944 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TRANK1O15050 2925 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 RBM47A0AV96 593 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 PTPDC1A2A3K4 754 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ASB14A6NK59 587 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 GRXCR1A8MXD5 290 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 TLR3O15455 904 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 EIF3JO75822 258 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 CD4P01730 458 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ICAM1P05362 532 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ZSCAN22P10073 491 aaPredicted RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 PDHBP11177 359 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 FOSL1P15407 271 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 PDCP20941 246 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ALDH5A1P51649 535 aaPredicted RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 NKX3-2P78367 333 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 KRT85P78386 507 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 FSCN1Q16658 493 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 MCMDC2Q4G0Z9 681 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 TMEM240Q5SV17 173 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 SYDE2Q5VT97 1194 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 MFSD5Q6N075 450 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 TAPT1Q6NXT6 567 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 USP38Q8NB14 1042 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 DCAF4Q8WV16 495 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 RANBP17Q9H2T7 1088 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 CPVLQ9H3G5 476 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 ATXN3LQ9H3M9 355 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 C1GALT1Q9NS00 363 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 MAP3K20Q9NYL2 800 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 PPM1HQ9ULR3 514 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 Q9Y3F1 56 aa6.35□□□□□ -1.39
CMTM1-207ENST00000465057 TCF20Q9UGU0 1960 aaKnown RBP6.35□□□□□ -1.39
CMTM1-207ENST00000465057 BAZ2BQ9UIF8 2168 aaKnown RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 GRIN2DO15399 1336 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 RAD50Q92878 1312 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 FAM170BA6NMN3 283 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 BECN2A8MW95 431 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 RBAK-RBAKDNI3L0D1 243 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 B4GALT4O60513 344 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CABYRO75952 493 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 GOLGA8HP0CJ92 632 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TOP1P11387 765 aaKnown RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CALML3P27482 149 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CASQ1P31415 396 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CCL23P55773 120 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TUBB4BP68371 445 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 ZNF252P-AS1Q0IIN9 211 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 PPIGQ13427 754 aaKnown RBP eCLIP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 ITGA7Q13683 1181 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 BAATQ14032 418 aaPredicted RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 USH1GQ495M9 461 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TTC31Q49AM3 519 aaPredicted RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 AKNAD1Q5T1N1 836 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 JAKMIP3Q5VZ66 844 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 BTNL9Q6UXG8 535 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 ZNF365Q70YC5 407 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CCDC186Q7Z3E2 898 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CCDC91Q7Z6B0 441 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TMEM199Q8N511 208 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 GOLGA5Q8TBA6 731 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CLEC4DQ8WXI8 215 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 UBXN4Q92575 508 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 COPS5Q92905 334 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TIFAQ96CG3 184 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 SCLYQ96I15 445 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 NAT10Q9H0A0 1025 aaKnown RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TRPV6Q9H1D0 765 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 WNT8AQ9H1J5 351 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TNMDQ9H2S6 317 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 HIPK3Q9H422 1215 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 C12orf49Q9H741 205 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 DISC1Q9NRI5 854 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 CACNA2D2Q9NY47 1150 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 FEZ2Q9UHY8 353 aaPredicted RBP6.34□□□□□ -1.39
CMTM1-207ENST00000465057 PYCARDQ9ULZ3 195 aa6.34□□□□□ -1.39
CMTM1-207ENST00000465057 TMEM265A0A087WTH1 108 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 ENC1O14682 589 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 FIBPO43427 364 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 STX6O43752 255 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 WNT11O96014 354 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 F13A1P00488 732 aa6.33□□□□□ -1.4
CMTM1-207ENST00000465057 MYL3P08590 195 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms