RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 OLFML3Q9NRN5 406 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 INPP5FQ9Y2H2 1132 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 GIT1Q9Y2X7 761 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 NLRC5Q86WI3 1866 aa15.92■□□□□ 0.14
SQSTM1-205ENST00000464493 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 TOM1L1O75674 476 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 ZNF202O95125 648 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 PROZP22891 400 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 AKAP5P24588 427 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 CASP1P29466 404 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 CTNNB1P35222 781 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 COASYQ13057 564 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 CUL4BQ13620 913 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 ZNF568Q3ZCX4 644 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 MPZL3Q6UWV2 235 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 UNC13DQ70J99 1090 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 URGCPQ8TCY9 931 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 MYLIPQ8WY64 445 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 ZBTB45Q96K62 511 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 GAD1Q99259 594 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 GAS2L1Q99501 681 aaPredicted RBP15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 PLVAPQ9BX97 442 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 SNTG2Q9NY99 539 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 KANSL3Q9P2N6 904 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 HCSTQ9UBK5 93 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 PARP2Q9UGN5 583 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 PCDHB13Q9Y5F0 798 aa15.91■□□□□ 0.14
SQSTM1-205ENST00000464493 PVALEFA0A1B0GWK0 134 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 ARL5CA6NH57 179 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 C5orf67F2Z3F1 127 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 H3BNC9 293 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 CLDN3O15551 220 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 PPP1R37O75864 691 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 GCNT3O95395 438 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 MCF2P10911 925 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 LIG4P49917 911 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 KRBA2Q6ZNG9 492 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 MAP4K3Q8IVH8 894 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 HVCN1Q96D96 273 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 STRA6Q9BX79 667 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 CDT1Q9H211 546 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 TBC1D13Q9NVG8 400 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 ANKFY1Q9P2R3 1169 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 PCDHB12Q9Y5F1 795 aa15.9■□□□□ 0.14
SQSTM1-205ENST00000464493 ABLIM1O14639 778 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 HNRNPDLO14979 420 aaKnown RBP15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 INPPL1O15357 1258 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 POMCP01189 267 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 PIGRP01833 764 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 MYL1P05976 194 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 MYBP10242 640 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 LAG3P18627 525 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 IGFBP4P22692 258 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 MLH1P40692 756 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 MATR3P43243 847 aaKnown RBP eCLIP15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 RNASELQ05823 741 aaKnown RBP15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 GPM6BQ13491 265 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 ALCAMQ13740 583 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 ADGRE1Q14246 886 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 FMR1NBQ8N0W7 255 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 GDPD5Q8WTR4 605 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 P2RX5Q93086 422 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 ZFP42Q96MM3 310 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 ACCSQ96QU6 501 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 C11orf84Q9BUA3 381 aaPredicted RBP15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 KLK14Q9P0G3 267 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 GDAQ9Y2T3 454 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 KIAA1671Q9BY89 1806 aa15.89■□□□□ 0.13
SQSTM1-205ENST00000464493 ZMYM2Q9UBW7 1377 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 GTPBP6O43824 516 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 LPXNO60711 386 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 RECQL4O94761 1208 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 HARSP12081 509 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 FOSL2P15408 326 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 GRM5P41594 1212 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 CASP5P51878 434 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 FAM160A1Q05DH4 1040 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 MCL1Q07820 350 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 EHHADHQ08426 723 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 SNW1Q13573 536 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 NOLC1Q14978 699 aaKnown RBP eCLIP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 L1TD1Q5T7N2 865 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 KCNT2Q6UVM3 1135 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 STXBP4Q6ZWJ1 553 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 CEP120Q8N960 986 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 KLHL23Q8NBE8 558 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 COLGALT1Q8NBJ5 622 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 TMEM87AQ8NBN3 555 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 GSTCDQ8NEC7 633 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 CCDC34Q96HJ3 373 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 FAM193BQ96PV7 902 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 CCDC94Q9BW85 323 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 FGFBP2Q9BYJ0 223 aa15.88■□□□□ 0.13
SQSTM1-205ENST00000464493 NRDE2Q9H7Z3 1164 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms