RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 RIT2Q99578 217 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 PPP1R12CQ9BZL4 782 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 ZMYND15Q9H091 742 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 ZSWIM4Q9H7M6 989 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 ERAP1Q9NZ08 941 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 SNX12Q9UMY4 172 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 NOD1Q9Y239 953 aa10.78□□□□□ -0.68
PTPRD-207ENST00000463477 EMSYQ7Z589 1322 aa10.77□□□□□ -0.68
PTPRD-207ENST00000463477 BTNL10A8MVZ5 291 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 TBCAO75347 108 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 CCNE2O96020 404 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 GNAT1P11488 350 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 TCP1P17987 556 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 NR2F2P24468 414 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 CYP2C18P33260 490 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 HOXD13P35453 343 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 MAGEA1P43355 309 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 SLC26A2P50443 739 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 ADAM17P78536 824 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 KCNH2Q12809 1159 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 GPS2Q13227 327 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 PTK7Q13308 1070 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 BFSP2Q13515 415 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF746Q6NUN9 644 aaPredicted RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 RINT1Q6NUQ1 792 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 DPY19L2P1Q6NXN4 242 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 B3GNT9Q6UX72 402 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 SFR1Q86XK3 245 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 NELFCDQ8IXH7 590 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 CAGE1Q8TC20 777 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 GLG1Q92896 1179 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 MKNK1Q9BUB5 465 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 LSM14BQ9BX40 385 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 AZI2Q9H6S1 392 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 TBC1D7Q9P0N9 293 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 RNF14Q9UBS8 474 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 ARMCX3Q9UH62 379 aaPredicted RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 PRDM4Q9UKN5 801 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 DAAM1Q9Y4D1 1078 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
PTPRD-207ENST00000463477 NRCAMQ92823 1304 aa10.77□□□□□ -0.69
PTPRD-207ENST00000463477 C17orf102A2RUQ5 167 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 EML1O00423 815 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ENC1O14682 589 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 AFPP02771 609 aaKnown RBP10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SMIM10L2AP0DMW4 78 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SMIM10L2BP0DMW5 78 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 CSF2RAP15509 400 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 STAT5BP51692 787 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF131P52739 623 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 VSNL1P62760 191 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ZNF200P98182 395 aaPredicted RBP10.76□□□□□ -0.69
PTPRD-207ENST00000463477 KRT76Q01546 638 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 PPIGQ13427 754 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTPRD-207ENST00000463477 HIC1Q14526 733 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SLC18A3Q16572 532 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 LRIT3Q3SXY7 679 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 MAP9Q49MG5 647 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 C1orf186Q6ZWK4 172 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 MMGT1Q8N4V1 131 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 AFAP1L1Q8TED9 768 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 MMS19Q96T76 1030 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 BHMT2Q9H2M3 363 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 VIPAS39Q9H9C1 493 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ODF2LQ9ULJ1 636 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 MACROD2A1Z1Q3 448 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SLITRK3O94933 977 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 IQCF3P0C7M6 154 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 PRKCIP41743 596 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 CASP5P51878 434 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 EPHB4P54760 987 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 CCL23P55773 120 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 EPHA7Q15375 998 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SHHQ15465 462 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 STXBP4Q6ZWJ1 553 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 C16orf59Q7L2K0 433 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 CREG2Q8IUH2 290 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 RPUSD2Q8IZ73 545 aaKnown RBP10.76□□□□□ -0.69
PTPRD-207ENST00000463477 TMEM174Q8WUU8 243 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ATP6V0A1Q93050 837 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 NOX5Q96PH1 765 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 NACC1Q96RE7 527 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 RUSC1Q9BVN2 902 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 WNT8AQ9H1J5 351 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 ABCB6Q9NP58 842 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 SETD4Q9NVD3 440 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 TFR2Q9UP52 801 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 PCDHA10Q9Y5I2 948 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 CAPN6Q9Y6Q1 641 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 DUSP10Q9Y6W6 482 aa10.76□□□□□ -0.69
PTPRD-207ENST00000463477 DOCK5Q9H7D0 1870 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms