RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 C8AP07357 584 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 DARSP14868 501 aaKnown RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 TMOD1P28289 359 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 GDI1P31150 447 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 HOXA9P31269 272 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 OR1G1P47890 313 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 RAB27AP51159 221 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 CLCN3P51790 818 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 KCNC4Q03721 635 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 SRSF1Q07955 248 aaKnown RBP eCLIP15.17■□□□□ 0.026e-7■■■□□ 17.9
C9orf3-211ENST00000463372 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 USP17L6PQ6QN14 398 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 RAB44Q7Z6P3 723 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 LSM14AQ8ND56 463 aaKnown RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 MSANTD3Q96H12 275 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 CRELD1Q96HD1 420 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 ZNF668Q96K58 619 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 MBOAT7Q96N66 472 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 DUSP15Q9H1R2 295 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-211ENST00000463372 ZFP14Q9HCL3 533 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 MARCH5Q9NX47 278 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 FBXW11Q9UKB1 542 aa15.17■□□□□ 0.02
C9orf3-211ENST00000463372 CAPN8A6NHC0 703 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 ZBTB42B2RXF5 422 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 CAPN9O14815 690 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-211ENST00000463372 RLBP1P12271 317 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 RPL17P18621 184 aaKnown RBP15.16■□□□□ 0.02
C9orf3-211ENST00000463372 MAP4K3Q8IVH8 894 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 APOL6Q9BWW8 343 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 CHST7Q9NS84 486 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 HCFC1R1Q9NWW0 138 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 UBIAD1Q9Y5Z9 338 aa15.16■□□□□ 0.02
C9orf3-211ENST00000463372 COL12A1Q99715 3063 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 PNMA6FA0A0J9YX94 578 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 POMCP01189 267 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-211ENST00000463372 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 PDXDC2PQ6P474 469 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 GPR65Q8IYL9 337 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 CSGALNACT1Q8TDX6 532 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
C9orf3-211ENST00000463372 ZSCAN10Q96SZ4 725 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-211ENST00000463372 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-211ENST00000463372 ZNF263O14978 683 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 MAGEB2O15479 319 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 EXTL3O43909 919 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 ZNF623O75123 536 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 PSMC3P17980 439 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 EFCAB12Q6NXP0 572 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-211ENST00000463372 FAM200AQ8TCP9 573 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 ZNF302Q9NR11 478 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 DNMT3BQ9UBC3 853 aaKnown RBP15.14■□□□□ 0.01
C9orf3-211ENST00000463372 SLC8A2Q9UPR5 921 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
C9orf3-211ENST00000463372 NFASCO94856 1347 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 NEDD4P46934 1319 aa15.14■□□□□ 0.01
C9orf3-211ENST00000463372 GOLGA4Q13439 2230 aaKnown RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 PTPRBP23467 1997 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 NR1I2O75469 434 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 CSDE1O75534 798 aaKnown RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 ATG7O95352 703 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 EFEMP2O95967 443 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 GPC3P51654 580 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 KPNA1P52294 538 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 IRX4P78413 519 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 LMAN2Q12907 356 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 KARSQ15046 597 aaKnown RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 CCNI2Q6ZMN8 369 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 TRMT1LQ7Z2T5 733 aaKnown RBP15.13■□□□□ 0.01
C9orf3-211ENST00000463372 SIRT2Q8IXJ6 389 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 SYNPOQ8N3V7 929 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 KCNH7Q9NS40 1196 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 CEP131Q9UPN4 1083 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 PCDHB15Q9Y5E8 787 aa15.13■□□□□ 0.01
C9orf3-211ENST00000463372 GON4LQ3T8J9 2241 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 PIK3CDO00329 1044 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 POU2F2P09086 479 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 SFPQP23246 707 aaKnown RBP eCLIP15.12■□□□□ 0.01
C9orf3-211ENST00000463372 FCARP24071 287 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 ABCG1P45844 678 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 NT5C2P49902 561 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 PIP4P1Q86T03 277 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 TBC1D10CQ8IV04 446 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 LRRC71Q8N4P6 559 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 SLC7A14Q8TBB6 771 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 GCOM2Q9BZD3 368 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-211ENST00000463372 RIOX1Q9H6W3 641 aa15.12■□□□□ 0.01
C9orf3-211ENST00000463372 C8orf33Q9H7E9 229 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-211ENST00000463372 CNTNAP2Q9UHC6 1331 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms