RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 WTAPQ15007 396 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 NR6A1Q15406 480 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CERKLQ49MI3 558 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 MIIPQ5JXC2 388 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 TRPM8Q7Z2W7 1104 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CACNA2D4Q7Z3S7 1137 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CDAN1Q8IWY9 1227 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CSGALNACT2Q8N6G5 542 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ENAHQ8N8S7 591 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ANKS1AQ92625 1134 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 DCPSQ96C86 337 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD27Q96NW4 1050 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 INPP4AQ96PE3 977 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 TSC22D3Q99576 134 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 PHF20Q9BVI0 1012 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ZIM2Q9NZV7 527 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 PRRT4C9JH25 899 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 NMT2O60551 498 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CTNND1O60716 968 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 AKR1B1P15121 316 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 XBP1P17861 261 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 MZF1P28698 734 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CNGA1P29973 690 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 GCLCP48506 637 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 NOVP48745 357 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 CLK1P49759 484 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 SQSTM1Q13501 440 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ASTE1Q2TB18 679 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 FAM133BQ5BKY9 247 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 TTC38Q5R3I4 469 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD20A2Q5SQ80 823 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD20A1Q5TYW2 823 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD20A3Q5VUR7 823 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 DGKHQ86XP1 1220 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 FANCBQ8NB91 859 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 MDM1Q8TC05 714 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 NUP133Q8WUM0 1156 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 TLCD1Q96CP7 247 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 DHTKD1Q96HY7 919 aaPredicted RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 NOC4LQ9BVI4 516 aaKnown RBP9.36□□□□□ -0.91
SHQ1-203ENST00000463369 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 PTPRFP10586 1907 aa9.36□□□□□ -0.91
SHQ1-203ENST00000463369 IGKV6D-41A0A0C4DH26 115 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 EPB42P16452 691 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GJA5P36382 358 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 FLT3P36888 993 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 MTIF2P46199 727 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 CTCFP49711 727 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 ALDH5A1P51649 535 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KCNJ2P63252 427 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 SEPT2Q15019 361 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 IL17AQ16552 155 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 IFIT1BQ5T764 474 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 NBPF12Q5TAG4 269 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 MEI1Q5TIA1 1274 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 ERICH1Q86X53 443 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KLHL7Q8IXQ5 586 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 ANKRD42Q8N9B4 389 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GIMAP8Q8ND71 665 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 ZFAND2BQ8WV99 257 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 UBLCP1Q8WVY7 318 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RNF26Q9BY78 433 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 TRIM55Q9BYV6 548 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 PRKD2Q9BZL6 878 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GOLGA6L10A0A0M3HER8 536 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 DPPA5A6NC42 116 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 SMAPO00193 183 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KLRC4O43908 158 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 SMIM24O75264 130 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 PALMO75781 387 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RHOBTB3O94955 611 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RARAP10276 462 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GNAT1P11488 350 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 VEGFAP15692 232 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 ATP2A2P16615 1042 aaKnown RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 RCAN1P53805 252 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 NCALDP61601 193 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KIAA0753Q2KHM9 967 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 KRT71Q3SY84 523 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 CHADLQ6NUI6 762 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 MTHFD1LQ6UB35 978 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 MIGA2Q7L4E1 593 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 APLFQ8IW19 511 aaPredicted RBP9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 GPRASP2Q96D09 838 aa9.35□□□□□ -0.91
SHQ1-203ENST00000463369 NAF1Q96HR8 494 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms