RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 VASNQ6EMK4 673 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 LIPIQ6XZB0 460 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 SPRED2Q7Z698 418 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 SESTD1Q86VW0 696 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 FAM129CQ86XR2 697 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 PPHLN1Q8NEY8 458 aaKnown RBP6.9□□□□□ -1.3
COPS3-205ENST00000463097 OR5AN1Q8NGI8 311 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 HOXB13Q92826 284 aaPredicted RBP6.9□□□□□ -1.3
COPS3-205ENST00000463097 RAB24Q969Q5 203 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 VRK1Q99986 396 aaPredicted RBP6.9□□□□□ -1.3
COPS3-205ENST00000463097 HAPLN2Q9GZV7 340 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 MANSC1Q9H8J5 431 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 ABCF2Q9UG63 623 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 RPTORQ8N122 1335 aa6.9□□□□□ -1.3
COPS3-205ENST00000463097 F8W8V4 182 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 FFAR2O15552 330 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 TMEM127O75204 238 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 MAFO75444 373 aaPredicted RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 HARSP12081 509 aaKnown RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 SYN1P17600 705 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CTSSP25774 331 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 TRHRP34981 398 aaPredicted RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 DDIT3P35638 169 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 SUMO3P55854 103 aaPredicted RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 MEF2AQ02078 507 aaPredicted RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 DGKDQ16760 1214 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 MPEG1Q2M385 716 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CR1LQ2VPA4 569 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 ARL13BQ3SXY8 428 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CIAPIN1Q6FI81 312 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 PDZD4Q76G19 769 aaPredicted RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 ANKRD18AQ8IVF6 992 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 LILRA2Q8N149 483 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 IL17REQ8NFR9 667 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 PPP1R14CQ8TAE6 165 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 MSLNLQ96KJ4 702 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 PPP1R16BQ96T49 567 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 SARS2Q9NP81 518 aaKnown RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 PRDM7Q9NQW5 492 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CNNM1Q9NRU3 951 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CALCOCO1Q9P1Z2 691 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 CPNE7Q9UBL6 633 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 LAS1LQ9Y4W2 734 aaKnown RBP6.89□□□□□ -1.31
COPS3-205ENST00000463097 CEP83Q9Y592 693 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
COPS3-205ENST00000463097 A0A1W2PR48 441 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 FAM163BP0C2L3 166 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 NPR1P16066 1061 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 ADSLP30566 484 aaPredicted RBP6.88□□□□□ -1.31
COPS3-205ENST00000463097 SLC6A9P48067 706 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 GEMIN4P57678 1058 aaKnown RBP6.88□□□□□ -1.31
COPS3-205ENST00000463097 ANTXR2P58335 489 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 ERVFRD-1P60508 538 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 CD69Q07108 199 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 TARDBPQ13148 414 aaKnown RBP eCLIP6.88□□□□□ -1.31
COPS3-205ENST00000463097 TBX2Q13207 712 aaPredicted RBP6.88□□□□□ -1.31
COPS3-205ENST00000463097 RAB39AQ14964 217 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 STILQ15468 1287 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 DACT2Q5SW24 774 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 KLHDC7AQ5VTJ3 777 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 KANK2Q63ZY3 851 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 GGT6Q6P531 493 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 MZT2AQ6P582 158 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 ETV3LQ6ZN32 361 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 RSPH3Q86UC2 560 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 OR10H5Q8NGA6 315 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 UBE2Q2Q8WVN8 375 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 SKA1Q96BD8 255 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 SUCLG2Q96I99 432 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 DYDC2Q96IM9 177 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 EIF2AK1Q9BQI3 630 aaKnown RBP6.88□□□□□ -1.31
COPS3-205ENST00000463097 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 BCAS3Q9H6U6 928 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 RRN3Q9NYV6 651 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 BCCIPQ9P287 314 aaKnown RBP eCLIP6.88□□□□□ -1.31
COPS3-205ENST00000463097 SIK3Q9Y2K2 1263 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
COPS3-205ENST00000463097 LRRFIP2Q9Y608 721 aaKnown RBP6.88□□□□□ -1.31
COPS3-205ENST00000463097 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 EPB41L2O43491 1005 aaKnown RBP6.87□□□□□ -1.31
COPS3-205ENST00000463097 PLA2G6O60733 806 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 PHF2O75151 1096 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 SKAP2O75563 359 aaPredicted RBP6.87□□□□□ -1.31
COPS3-205ENST00000463097 MPOP05164 745 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 MALP21145 153 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 SMARCA1P28370 1054 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 PDIA3P30101 505 aaKnown RBP6.87□□□□□ -1.31
COPS3-205ENST00000463097 GDNFP39905 211 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 CASP2P42575 452 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 NKX3-2P78367 333 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 IL13RA1P78552 427 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 CD83Q01151 205 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
COPS3-205ENST00000463097 SNAPC2Q13487 334 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 SLC35G1Q2M3R5 365 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 ABHD15Q6UXT9 468 aa6.87□□□□□ -1.31
COPS3-205ENST00000463097 RPTNQ6XPR3 784 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms