RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 HTRA4P83105 476 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-221ENST00000462352 MCL1Q07820 350 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE1-221ENST00000462352 BMT2Q1RMZ1 405 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 LRIT3Q3SXY7 679 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-221ENST00000462352 NELFCDQ8IXH7 590 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 SYCP3Q8IZU3 236 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 PGBD4Q96DM1 585 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 RC3H2Q9HBD1 1191 aaKnown RBP12.91□□□□□ -0.34
CPNE1-221ENST00000462352 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 ZMYM2Q9UBW7 1377 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 HOXA2O43364 376 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 TLL1O43897 1013 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 HARSP12081 509 aaKnown RBP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 GATMP50440 423 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF658Q5TYW1 1059 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 AGMOQ6ZNB7 445 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 CEP120Q8N960 986 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF689Q96CS4 500 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-221ENST00000462352 YME1L1Q96TA2 773 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 RAD9AQ99638 391 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 APOL6Q9BWW8 343 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 PBX4Q9BYU1 374 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 GBP3Q9H0R5 595 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 RNF19AQ9NV58 838 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 MAN1B1Q9UKM7 699 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 STYXL1Q9Y6J8 313 aa12.9□□□□□ -0.34
CPNE1-221ENST00000462352 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 A0A0B4J269 797 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 BIN1O00499 593 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 MYOGP15173 224 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 PTMSP20962 102 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 AKAP5P24588 427 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 ADSSP30520 456 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 PBX2P40425 430 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 GRM5P41594 1212 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 OSTNP61366 133 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
CPNE1-221ENST00000462352 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
CPNE1-221ENST00000462352 SLFN12LQ6IEE8 588 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 GUF1Q8N442 669 aaKnown RBP12.89□□□□□ -0.35
CPNE1-221ENST00000462352 HELQQ8TDG4 1101 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 MSTO1Q9BUK6 570 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 RSAD1Q9HA92 442 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 MAPK8IP1Q9UQF2 711 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 INSL6Q9Y581 213 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 PCDHA11Q9Y5I1 949 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
CPNE1-221ENST00000462352 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 FAM189A1O60320 539 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 OFD1O75665 1012 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 KIF20AO95235 890 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 GARTP22102 1010 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 MORC3Q14149 939 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 RAB30Q15771 203 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
CPNE1-221ENST00000462352 SEZ6Q53EL9 994 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 GLB1LQ6UWU2 654 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 ABI1Q8IZP0 508 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-221ENST00000462352 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 CCDC94Q9BW85 323 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-221ENST00000462352 GTPBP4Q9BZE4 634 aaKnown RBP12.88□□□□□ -0.35
CPNE1-221ENST00000462352 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 AGPAT3Q9NRZ7 376 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
CPNE1-221ENST00000462352 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
CPNE1-221ENST00000462352 ARL5CA6NH57 179 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-221ENST00000462352 PDXKO00764 312 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 OGTO15294 1046 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 RECQL4O94761 1208 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 CA3P07451 260 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 BMP6P22004 513 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 DNAJB2P25686 324 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 MLH1P40692 756 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 TNFSF9P41273 254 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 PRCPP42785 496 aa12.87□□□□□ -0.35
CPNE1-221ENST00000462352 AFF1P51825 1210 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms