RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SOD2P04179 222 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 SPATA31C1P0DKV0 1188 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 SP100P23497 879 aaPredicted RBP9.78□□□□□ -0.84
LDB1-203ENST00000461873 AKAP5P24588 427 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.84
LDB1-203ENST00000461873 GJB2P29033 226 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 MATR3P43243 847 aaKnown RBP eCLIP9.78□□□□□ -0.84
LDB1-203ENST00000461873 GLUD2P49448 558 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 SCNN1GP51170 649 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 SMTNP53814 917 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 GRIK3Q13003 919 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 STRN3Q13033 797 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 DCAF4L1Q3SXM0 396 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 RARS2Q5T160 578 aaKnown RBP9.78□□□□□ -0.84
LDB1-203ENST00000461873 LARP1BQ659C4 914 aaKnown RBP9.78□□□□□ -0.84
LDB1-203ENST00000461873 PLCD3Q8N3E9 789 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
LDB1-203ENST00000461873 AUTS2Q8WXX7 1259 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 ADAM7Q9H2U9 754 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 SFXN1Q9H9B4 322 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 PIDD1Q9HB75 910 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 GPRC5CQ9NQ84 441 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 HES2Q9Y543 173 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 IRAK3Q9Y616 596 aa9.78□□□□□ -0.84
LDB1-203ENST00000461873 ACKR2O00590 384 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 DDHD2O94830 711 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 BMP15O95972 392 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 GLUD1P00367 558 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 KRT18P05783 430 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 THP07101 528 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 PRPHP41219 470 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 RBM10P98175 930 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 ST3GAL1Q11201 340 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 USP41Q3LFD5 358 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 HERC4Q5GLZ8 1057 aaPredicted RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 CDR2LQ86X02 465 aaPredicted RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 SMG8Q8ND04 991 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 STAMQ92783 540 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 EDAQ92838 391 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 PBXIP1Q96AQ6 731 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 CALML4Q96GE6 196 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 TMX3Q96JJ7 454 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 TIPINQ9BVW5 301 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 CCDC94Q9BW85 323 aaPredicted RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 NXF3Q9H4D5 531 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 KMT5AQ9NQR1 393 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.77□□□□□ -0.85
LDB1-203ENST00000461873 TOPORSQ9NS56 1045 aaPredicted RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 KLK14Q9P0G3 267 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
LDB1-203ENST00000461873 PCDHB6Q9Y5E3 794 aa9.77□□□□□ -0.85
LDB1-203ENST00000461873 SF3B1O75533 1304 aaKnown RBP eCLIP9.77□□□□□ -0.85
LDB1-203ENST00000461873 VWA3AA6NCI4 1184 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 LOC730098B7Z3J9 87 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 H0YCG3 227 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 WNT7AO00755 349 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 B4GALT5O43286 388 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 PDCP20941 246 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 RFX1P22670 979 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 UBA7P41226 1012 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 PEX3P56589 373 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 TUSC3Q13454 348 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 MTMR3Q13615 1198 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 NBR1Q14596 966 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 PTPN14Q15678 1187 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 CDCA2Q69YH5 1023 aaPredicted RBP9.76□□□□□ -0.85
LDB1-203ENST00000461873 PDXDC1Q6P996 788 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 SYCE2Q6PIF2 218 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 TMC5Q6UXY8 1006 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 CCDC149Q6ZUS6 474 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 TMEM173Q86WV6 379 aaPredicted RBP9.76□□□□□ -0.85
LDB1-203ENST00000461873 CEP57Q86XR8 500 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 COLGALT2Q8IYK4 626 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 VN1R2Q8NFZ6 395 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 KHSRPQ92945 711 aaKnown RBP eCLIP9.76□□□□□ -0.85
LDB1-203ENST00000461873 FBXL18Q96ME1 805 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 ZFP42Q96MM3 310 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 KLHL5Q96PQ7 755 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 PRRX2Q99811 253 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 HERC2P3Q9BVR0 1158 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 MRPL4Q9BYD3 311 aaKnown RBP9.76□□□□□ -0.85
LDB1-203ENST00000461873 FZD8Q9H461 694 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 C17orf75Q9HAS0 396 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 SNTG2Q9NY99 539 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 ADAM28Q9UKQ2 775 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 GDAQ9Y2T3 454 aa9.76□□□□□ -0.85
LDB1-203ENST00000461873 ARIH1Q9Y4X5 557 aaPredicted RBP9.76□□□□□ -0.85
LDB1-203ENST00000461873 ZMYM2Q9UBW7 1377 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 TRAPPC3O43617 180 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 CNPP09543 421 aaKnown RBP9.75□□□□□ -0.85
LDB1-203ENST00000461873 EPCAMP16422 314 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 PLA2G5P39877 138 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 ZXDAP98168 799 aa9.75□□□□□ -0.85
LDB1-203ENST00000461873 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
LDB1-203ENST00000461873 ZNF568Q3ZCX4 644 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms