RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 COL20A1Q9P218 1284 aa5.84□□□□□ -1.47
BRCA1-206ENST00000461574 MRPL11Q9Y3B7 192 aaKnown RBP5.84□□□□□ -1.47
BRCA1-206ENST00000461574 ZNF292O60281 2723 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 DCHS1Q96JQ0 3298 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 TTC41PQ6P2S7 1318 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 TREHO43280 583 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 SRGAP2BP0DMP2 458 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 SMIM10L2AP0DMW4 78 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 SMIM10L2BP0DMW5 78 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 GHRP10912 638 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 ADH5P11766 374 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 IBSPP21815 317 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 NRIP1P48552 1158 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 RRP1P56182 461 aaKnown RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 ARHGAP4P98171 946 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 HSDL1Q3SXM5 330 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 RBM23Q86U06 439 aaKnown RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 SMRP1Q8NCR6 262 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 MICAL1Q8TDZ2 1067 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 SNX29Q8TEQ0 813 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 TBC1D5Q92609 795 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 TTC14Q96N46 770 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 MAF1Q9H063 256 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 CPVLQ9H3G5 476 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 KAT14Q9H8E8 782 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 VAT1LQ9HCJ6 419 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 ANAPC4Q9UJX5 808 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 ZNF215Q9UL58 517 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 BARX2Q9UMQ3 279 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 USP15Q9Y4E8 981 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-206ENST00000461574 LOXHD1Q8IVV2 1947 aa5.83□□□□□ -1.48
BRCA1-206ENST00000461574 FSD2A1L4K1 749 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 LOC730098B7Z3J9 87 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 EYA4O95677 639 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 LGALS2P05162 132 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 CTSBP07858 339 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 NFICP08651 508 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ITGB5P18084 799 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 UBA1P22314 1058 aaKnown RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 SP100P23497 879 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 CCND2P30279 289 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 AVPR2P30518 371 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 NOVP48745 357 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 HAND2P61296 217 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 SP4Q02446 784 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ADAM15Q13444 863 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 PTPN21Q16825 1174 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 GNPTABQ3T906 1256 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 PAN2Q504Q3 1202 aaKnown RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ASPRV1Q53RT3 343 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 CELF3Q5SZQ8 465 aaKnown RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 SPOUT1Q5T280 376 aaKnown RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 VPS53Q5VIR6 699 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ALKBH2Q6NS38 261 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 MFSD6Q6ZSS7 791 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ERMP1Q7Z2K6 904 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ADGRD2Q7Z7M1 963 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 RSPH3Q86UC2 560 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 IQCA1Q86XH1 822 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ADGRF4Q8IZF3 695 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 EFHBQ8N7U6 833 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 FLCNQ8NFG4 579 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ESR2Q92731 530 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ASIC4Q96FT7 647 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 MSLNLQ96KJ4 702 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 C16orf70Q9BSU1 422 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 YIPF2Q9BWQ6 316 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 PHF7Q9BWX1 381 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 MFSD1Q9H3U5 465 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 RNPEPQ9H4A4 650 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 RNF41Q9H4P4 317 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 TLE6Q9H808 572 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 TCP11L1Q9NUJ3 509 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 SETD4Q9NVD3 440 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ZC3H7BQ9UGR2 993 aaKnown RBP5.82□□□□□ -1.48
BRCA1-206ENST00000461574 PLAGL2Q9UPG8 496 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 ACTL7BQ9Y614 415 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 CACNA1HO95180 2353 aa5.82□□□□□ -1.48
BRCA1-206ENST00000461574 TTC3P53804 2025 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 M0QZ92 97 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 FOXP2O15409 715 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 C8AP07357 584 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 PARP1P09874 1014 aaKnown RBP5.81□□□□□ -1.48
BRCA1-206ENST00000461574 STAG3L1P0CL83 205 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 SNHG28P0DPA3 235 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 TGFB3P10600 412 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 PCP11498 1178 aaKnown RBP5.81□□□□□ -1.48
BRCA1-206ENST00000461574 RAB6AP20340 208 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 MAOBP27338 520 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 HOXA13P31271 388 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-206ENST00000461574 ICAM3P32942 547 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 ID4P47928 161 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 COASYQ13057 564 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 AAMPQ13685 434 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 PGM5Q15124 567 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 QRICH1Q2TAL8 776 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 CCDC178Q5BJE1 867 aa5.81□□□□□ -1.48
BRCA1-206ENST00000461574 UTP14CQ5TAP6 766 aaKnown RBP5.81□□□□□ -1.48
BRCA1-206ENST00000461574 MCTP2Q6DN12 878 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms