RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ERLIN2O94905 339 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 STBD1O95210 358 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 SRGAP2CP0DJJ0 459 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 HOXA11P31270 313 aaPredicted RBP19.23■□□□□ 0.67
TOP3A-202ENST00000461127 MLH1P40692 756 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 AKAP17AQ02040 695 aaKnown RBP19.23■□□□□ 0.67
TOP3A-202ENST00000461127 UBXN11Q5T124 520 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 LIN9Q5TKA1 542 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 FUT10Q6P4F1 479 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
TOP3A-202ENST00000461127 CCDC148Q8NFR7 591 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 PSPC1Q8WXF1 523 aaKnown RBP19.23■□□□□ 0.67
TOP3A-202ENST00000461127 B3GALT6Q96L58 329 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 GAD1Q99259 594 aa19.23■□□□□ 0.67
TOP3A-202ENST00000461127 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
TOP3A-202ENST00000461127 TDRD15B5MCY1 1934 aaKnown RBP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 HNRNPA1P09651 372 aaKnown RBP eCLIP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 ADD1P35611 737 aaKnown RBP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 SCNN1GP51170 649 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 NCBP1Q09161 790 aaKnown RBP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 HACE1Q8IYU2 909 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 SMG8Q8ND04 991 aaKnown RBP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 NELL1Q92832 810 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 FGF13Q92913 245 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 GJA10Q969M2 543 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 MBOAT7Q96N66 472 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 PHF20Q9BVI0 1012 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 MRPS17Q9Y2R5 130 aaKnown RBP19.22■□□□□ 0.67
TOP3A-202ENST00000461127 IPPQ9Y573 584 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 CFAP47Q6ZTR5 3102 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 DOCK6Q96HP0 2047 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 CHD6Q8TD26 2715 aa19.22■□□□□ 0.67
TOP3A-202ENST00000461127 XYLBO75191 536 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 CD72P21854 359 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 RPS9P46781 194 aaKnown RBP19.21■□□□□ 0.67
TOP3A-202ENST00000461127 PSMC5P62195 406 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 FGD1P98174 961 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 EXOSC10Q01780 885 aaKnown RBP19.21■□□□□ 0.67
TOP3A-202ENST00000461127 PPM1LQ5SGD2 360 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 ANO5Q75V66 913 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 NETO1Q8TDF5 533 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 PRPF31Q8WWY3 499 aaKnown RBP19.21■□□□□ 0.67
TOP3A-202ENST00000461127 CLDN23Q96B33 292 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 CCDC51Q96ER9 411 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 GPR62Q9BZJ7 368 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 MINDY3Q9H8M7 445 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 ADAM28Q9UKQ2 775 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 POLIQ9UNA4 740 aa19.21■□□□□ 0.67
TOP3A-202ENST00000461127 ZFHX4Q86UP3 3567 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 F8W810 466 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PRPF3O43395 683 aaKnown RBP19.2■□□□□ 0.66
TOP3A-202ENST00000461127 DKC1O60832 514 aaKnown RBP eCLIP19.2■□□□□ 0.66
TOP3A-202ENST00000461127 RPL17P18621 184 aaKnown RBP19.2■□□□□ 0.66
TOP3A-202ENST00000461127 TGM1P22735 817 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 AXLP30530 894 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 NRLP54845 237 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PPP2R5DQ14738 602 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PCBP1Q15365 356 aaKnown RBP eCLIP19.2■□□□□ 0.66
TOP3A-202ENST00000461127 Q4G0T1 1027 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PPM1JQ5JR12 505 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 NOTUMQ6P988 496 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 ZNF852Q6ZMS4 543 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 TPRG1Q6ZUI0 275 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 ZFP42Q96MM3 310 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 ESYT1Q9BSJ8 1104 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 C22orf23Q9BZE7 217 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 TRIM6Q9C030 488 aaPredicted RBP19.2■□□□□ 0.66
TOP3A-202ENST00000461127 FBXW11Q9UKB1 542 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 PPME1Q9Y570 386 aa19.2■□□□□ 0.66
TOP3A-202ENST00000461127 USP24Q9UPU5 2620 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 ASAP2O43150 1006 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 TADA2AO75478 443 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 TARSP26639 723 aaKnown RBP19.19■□□□□ 0.66
TOP3A-202ENST00000461127 NTHL1P78549 312 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 TSSK4Q6SA08 328 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 RNF149Q8NC42 400 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 TCP11Q8WWU5 503 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 TMEM143Q96AN5 459 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 CEP170P1Q96L14 293 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 KXD1Q9BQD3 176 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 PRMT8Q9NR22 394 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-202ENST00000461127 GIT1Q9Y2X7 761 aa19.19■□□□□ 0.66
TOP3A-202ENST00000461127 SF3B1O75533 1304 aaKnown RBP eCLIP19.19■□□□□ 0.668e-6■■■■■ 94.3
TOP3A-202ENST00000461127 SLC30A4O14863 429 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 CDC45O75419 566 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 C8AP07357 584 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 HOXA9P31269 272 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 RFC5P40937 340 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 SPEM2Q0P670 501 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 LAIR1Q6GTX8 287 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 B3GNT9Q6UX72 402 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 TBCKQ8TEA7 893 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 APOL6Q9BWW8 343 aa19.18■□□□□ 0.66
TOP3A-202ENST00000461127 EIF2AQ9BY44 585 aaKnown RBP19.18■□□□□ 0.66
TOP3A-202ENST00000461127 PARD6AQ9NPB6 346 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms