RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 MXI1P50539 228 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 EFNA5P52803 228 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 SP4Q02446 784 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 PLCB4Q15147 1175 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 TDRD12Q587J7 1177 aaKnown RBP11.79□□□□□ -0.52
IFT88-204ENST00000461115 KRT39Q6A163 491 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 RABGGTAQ92696 567 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
IFT88-204ENST00000461115 PTPN18Q99952 460 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 KIFC3Q9BVG8 833 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 SMARCAD1Q9H4L7 1026 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 NAGPAQ9UK23 515 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 TFR2Q9UP52 801 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 ANK1P16157 1881 aa11.79□□□□□ -0.52
IFT88-204ENST00000461115 LRRIQ3A6PVS8 624 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 HNRNPDLO14979 420 aaKnown RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 HBP1O60381 514 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 EVI5O60447 810 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 TACC1O75410 805 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 LDHAP00338 332 aaKnown RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 ITIH3Q06033 890 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 CAPSQ13938 189 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 PSMD6Q15008 389 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 TCEAL1Q15170 157 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 CST9Q5W186 159 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 GJB7Q6PEY0 223 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 ILDR2Q71H61 639 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 FBXO16Q8IX29 292 aaPredicted RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 DHX37Q8IY37 1157 aaKnown RBP11.78□□□□□ -0.52
IFT88-204ENST00000461115 LINC01465Q8N7H1 131 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 MNS1Q8NEH6 495 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 FAM81BQ96LP2 452 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 NFKBIZQ9BYH8 718 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 SALL4Q9UJQ4 1053 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 COL1A2P08123 1366 aa11.78□□□□□ -0.52
IFT88-204ENST00000461115 A0A0B4J269 797 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 ZNF233A6NK53 670 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 K7ERI5 159 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 DDX3XO00571 662 aaKnown RBP eCLIP11.77□□□□□ -0.52
IFT88-204ENST00000461115 ABLIM1O14639 778 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 ASAP2O43150 1006 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 MSCO60682 206 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 SNAI1O95863 264 aaPredicted RBP11.77□□□□□ -0.52
IFT88-204ENST00000461115 MAPK4P31152 587 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 GRM1Q13255 1194 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 CRELD2Q6UXH1 353 aaPredicted RBP11.77□□□□□ -0.52
IFT88-204ENST00000461115 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 GPR142Q7Z601 462 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 GPR161Q8N6U8 529 aaKnown RBP11.77□□□□□ -0.52
IFT88-204ENST00000461115 RDH13Q8NBN7 331 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 PPTC7Q8NI37 304 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 POMGNT1Q8WZA1 660 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 UBXN4Q92575 508 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 SPATA33Q96N06 139 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.52
IFT88-204ENST00000461115 SLC15A5A6NIM6 579 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 FAM189A1O60320 539 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 CELF2O95319 508 aaKnown RBP11.77□□□□□ -0.53
IFT88-204ENST00000461115 GH1P01241 217 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 IGHA2P01877 340 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 ATP1A1P05023 1023 aaKnown RBP11.77□□□□□ -0.53
IFT88-204ENST00000461115 PROZP22891 400 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 PBX2P40425 430 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 GCLMP48507 274 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.53
IFT88-204ENST00000461115 GCNT1Q02742 428 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 STRN3Q13033 797 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 ELF2Q15723 593 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 ZACNQ401N2 412 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
IFT88-204ENST00000461115 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 FAM71AQ8IYT1 594 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 FBXL13Q8NEE6 735 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 DEPTORQ8TB45 409 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 HELQQ8TDG4 1101 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 UBE2Q2Q8WVN8 375 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
IFT88-204ENST00000461115 SHC3Q92529 594 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 NOX5Q96PH1 765 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 HAPLN2Q9GZV7 340 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 CRISPLD2Q9H0B8 497 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
IFT88-204ENST00000461115 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms