RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SURF1Q15526 300 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 EDRF1Q3B7T1 1238 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ZC2HC1CQ53FD0 456 aaPredicted RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 TRAF7Q6Q0C0 670 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 CD302Q8IX05 232 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ABI1Q8IZP0 508 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ADSSL1Q8N142 457 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF687Q8N1G0 1237 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 PHOSPHO2Q8TCD6 241 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 TMEM40Q8WWA1 233 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 FIZ1Q96SL8 496 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ADAM2Q99965 735 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 MSTO1Q9BUK6 570 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 TARS2Q9BW92 718 aaKnown RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ELAC1Q9H777 363 aaKnown RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 CDHR5Q9HBB8 845 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 RGS18Q9NS28 235 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ZMYND8Q9ULU4 1186 aaPredicted RBP12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 TRAF3IP3Q9Y228 551 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 ADGRA3Q8IWK6 1321 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 DOCK5Q9H7D0 1870 aa12.04□□□□□ -0.48
SMNDC1-203ENST00000460483 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 OGTO15294 1046 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 XPOTO43592 962 aaKnown RBP12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 CCNE1P24864 410 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 PRCPP42785 496 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 MCL1Q07820 350 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 NFIL3Q16649 462 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 SLC9A9Q8IVB4 645 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 C12orf56Q8IXR9 622 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 KIAA0895Q8NCT3 520 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 ANKRD20A12PQ8NF67 263 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 NOC3LQ8WTT2 800 aaKnown RBP12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 P2RX5Q93086 422 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 MINDY3Q9H8M7 445 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 PLEKHA5Q9HAU0 1116 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 TMEM161AQ9NX61 479 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 KANSL3Q9P2N6 904 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 STYXL1Q9Y6J8 313 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
SMNDC1-203ENST00000460483 ZNF233A6NK53 670 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ZBBXA8MT70 800 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 SMTNL1A8MU46 457 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 BECN2A8MW95 431 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 EXOC3O60645 756 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 CSDE1O75534 798 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 TPM2P07951 284 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 CLTAP09496 248 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ITGA4P13612 1032 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 SYN1P17600 705 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 HOXA11P31270 313 aaPredicted RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 CASP5P51878 434 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 MBTPS1Q14703 1052 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 AMHR2Q16671 573 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ZSCAN23Q3MJ62 389 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ISM2Q6H9L7 571 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 CENPPQ6IPU0 288 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 GLB1LQ6UWU2 654 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 NPAS4Q8IUM7 802 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 GPD1LQ8N335 351 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 HPS3Q969F9 1004 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 RNF166Q96A37 237 aaPredicted RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 SLC9A7Q96T83 725 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 MRPL9Q9BYD2 267 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 PDZD7Q9H5P4 517 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 METTL14Q9HCE5 456 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 AGPAT3Q9NRZ7 376 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 MAGEC2Q9UBF1 373 aaPredicted RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 AGO2Q9UKV8 859 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 MAPK8IP1Q9UQF2 711 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 GDAQ9Y2T3 454 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 GIT1Q9Y2X7 761 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 R3HCC1Q9Y3T6 440 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 PCDHB2Q9Y5E7 798 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 SLC4A7Q9Y6M7 1214 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 ZMYM2Q9UBW7 1377 aa12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.49
SMNDC1-203ENST00000460483 A0A0B4J269 797 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 SYCE3A1L190 88 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 ENPP3O14638 875 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 MAPK13O15264 365 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 B4GALT5O43286 388 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 EXTL3O43909 919 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 STX10O60499 249 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 EPB41P11171 864 aaKnown RBP12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 KRT13P13646 458 aa12.01□□□□□ -0.49
SMNDC1-203ENST00000460483 PROZP22891 400 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms