RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LINC00310P59036 64 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 BPIFB4P59827 614 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 BRD3Q15059 726 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 KCNA10Q16322 511 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 KIAA0753Q2KHM9 967 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 DAAM2Q86T65 1068 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 FAM43AQ8N2R8 423 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 ANKRD53Q8N9V6 530 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 C3orf20Q8ND61 904 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 OR7D4Q8NG98 312 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 OR14K1Q8NGZ2 314 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 SVIPQ8NHG7 77 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 KLHDC4Q8TBB5 520 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 CYFIP2Q96F07 1278 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 RPL10LQ96L21 214 aaKnown RBP6.92□□□□□ -1.3
CCDC50-203ENST00000460064 RPS6KC1Q96S38 1066 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 MPHOSPH6Q99547 160 aaKnown RBP6.92□□□□□ -1.3
CCDC50-203ENST00000460064 LRFN3Q9BTN0 628 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 B3GNT5Q9BYG0 378 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 SLC6A15Q9H2J7 730 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 CD320Q9NPF0 282 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 GPRC5DQ9NZD1 345 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 POLHQ9Y253 713 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 STXBP5LQ9Y2K9 1186 aa6.92□□□□□ -1.3
CCDC50-203ENST00000460064 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ITGA10O75578 1167 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 GASTP01350 101 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 PTPN7P35236 360 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 SREBF1P36956 1147 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ADCY7P51828 1080 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 NEK3P51956 506 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 DUSP2Q05923 314 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 TBR1Q16650 682 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ANO6Q4KMQ2 910 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 KHDC1Q4VXA5 237 aaKnown RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF648Q5T619 568 aaPredicted RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 DARS2Q6PI48 645 aaKnown RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 RALYLQ86SE5 291 aaKnown RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF761Q86XN6 746 aaPredicted RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 KIAA0319LQ8IZA0 1049 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 NSUN6Q8TEA1 469 aaKnown RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 FBXO41Q8TF61 875 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 STON2Q8WXE9 905 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 CDK5RAP3Q96JB5 506 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 TMX3Q96JJ7 454 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 PSMD1Q99460 953 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 VRK1Q99986 396 aaPredicted RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 PDCD2LQ9BRP1 358 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 SENP6Q9GZR1 1112 aaPredicted RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF700Q9H0M5 742 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 LDAHQ9H6V9 325 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 TRPS1Q9UHF7 1281 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 L1RE1Q9UN81 338 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 RNF114Q9Y508 228 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 PCDHA3Q9Y5H8 950 aa6.91□□□□□ -1.3
CCDC50-203ENST00000460064 MYBBP1AQ9BQG0 1328 aaKnown RBP6.91□□□□□ -1.3
CCDC50-203ENST00000460064 ANO9A1A5B4 782 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 MROH6A6NGR9 719 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 LRRC14BA6NHZ5 514 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 H3BUI4 141 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 B4GALT4O60513 344 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 HRGP04196 525 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 JUNP05412 331 aaKnown RBP6.9□□□□□ -1.3
CCDC50-203ENST00000460064 VSIG10L2P0DP72 767 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 GYPEP15421 78 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 CRHR1P34998 444 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 RAP1GAPP47736 663 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 ZNF568Q3ZCX4 644 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 RNF220Q5VTB9 566 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 TMEM151BQ8IW70 566 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 LINC01356Q8N9X3 169 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 BHLHE22Q8NFJ8 381 aaPredicted RBP6.9□□□□□ -1.3
CCDC50-203ENST00000460064 OR5M3Q8NGP4 307 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 DMRTA2Q96SC8 542 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 ARMT1Q9H993 441 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 LANCL2Q9NS86 450 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 NCDNQ9UBB6 729 aa6.9□□□□□ -1.3
CCDC50-203ENST00000460064 CAPN8A6NHC0 703 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 ADCY6O43306 1168 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 TSPAN15O95858 294 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 AMY1AP04745 511 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 IL12RB1P42701 662 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 AGFG1P52594 562 aaKnown RBP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 HK3P52790 923 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 FAM193AP78312 1265 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 TARDBPQ13148 414 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 NOGQ13253 232 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 OGFOD2Q6N063 350 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 GADL1Q6ZQY3 521 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 FAM124AQ86V42 546 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 KBTBD2Q8IY47 623 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 SH2D3CQ8N5H7 860 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 LILRA3Q8N6C8 439 aaPredicted RBP6.89□□□□□ -1.31
CCDC50-203ENST00000460064 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
CCDC50-203ENST00000460064 TP53I13Q8NBR0 393 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms