RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SH2D3AQ9BRG2 576 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 LXNQ9BS40 222 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 COLEC11Q9BWP8 271 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 TRIM6Q9C030 488 aaPredicted RBP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 SEMA4AQ9H3S1 761 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 PLEKHA4Q9H4M7 779 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 KCNK12Q9HB15 430 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 WDR6Q9NNW5 1121 aaKnown RBP8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 KCNMB3Q9NPA1 279 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 MAN1C1Q9NR34 630 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 WNT16Q9UBV4 365 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 VAV3Q9UKW4 847 aa8.94□□□□□ -0.98
NIF3L1-209ENST00000454952 CCDC195A0A1B0GUA6 201 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 MEIS3P2A8K0S8 358 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 EML1O00423 815 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC37A4O43826 429 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 CCNT1O60563 726 aaKnown RBP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 DDHD2O94830 711 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 POMCP01189 267 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 HOXA11P31270 313 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 GBP2P32456 591 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 OR1G1P47890 313 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 NPEPPSP55786 919 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 TOB2Q14106 344 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 XKR9Q5GH70 373 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 ERMP1Q7Z2K6 904 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 COLGALT2Q8IYK4 626 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 SIX5Q8N196 739 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 PHF20Q9BVI0 1012 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 VN1R3Q9BXE9 311 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 PIDD1Q9HB75 910 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 RXFP1Q9HBX9 757 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 BRMS1Q9HCU9 246 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 ZDHHC7Q9NXF8 308 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 EPS15L1Q9UBC2 864 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 GIT1Q9Y2X7 761 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 IPPQ9Y573 584 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 ZFP37Q9Y6Q3 630 aaPredicted RBP8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 CLUHO75153 1309 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 STK36Q9NRP7 1315 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 DOCK8Q8NF50 2099 aa8.93□□□□□ -0.98
NIF3L1-209ENST00000454952 ARL5CA6NH57 179 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 INO80B-WBP1J3KQ70 363 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 C2CD2LO14523 706 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 TEX28O15482 410 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 DGAT1O75907 488 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 PAPLNO95428 1278 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 SRFP11831 508 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 PTENP60484 403 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 DSG1Q02413 1049 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 DSC1Q08554 894 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 NPY5RQ15761 445 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 USP41Q3LFD5 358 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 UBXN11Q5T124 520 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 KIAA0319Q5VV43 1072 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 CWF19L1Q69YN2 538 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 NCAPH2Q6IBW4 605 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 KANK3Q6NY19 840 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 ZC3H14Q6PJT7 736 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 FRMD5Q7Z6J6 570 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 DTWD2Q8NBA8 298 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 SMG7Q92540 1137 aaKnown RBP8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 GAD1Q99259 594 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 NFKBIZQ9BYH8 718 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 CSRNP2Q9H175 543 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 SMOC2Q9H3U7 446 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 MINDY3Q9H8M7 445 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 ANKEF1Q9NU02 776 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 FNIP2Q9P278 1114 aa8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 PRG3Q9Y2Y8 225 aaPredicted RBP8.92□□□□□ -0.98
NIF3L1-209ENST00000454952 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 SF3B1O75533 1304 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 B4GALT3O60512 393 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 TSPAN1O60635 241 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 LYPLA2O95372 231 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 XRCC6P12956 609 aaKnown RBP eCLIP8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 NPR3P17342 541 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 MLH1P40692 756 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 GRIK3Q13003 919 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 ANKRD1Q15327 319 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 ANGPT1Q15389 498 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 PDXDC1Q6P996 788 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 PIK3AP1Q6ZUJ8 805 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 TPH2Q8IWU9 490 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 RNF168Q8IYW5 571 aaPredicted RBP8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 SMG8Q8ND04 991 aaKnown RBP8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 HAS1Q92839 578 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 BORCS6Q96GS4 357 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 SHDQ96IW2 340 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 CHST7Q9NS84 486 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 MARCH5Q9NX47 278 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 PCDHA12Q9UN75 941 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 KCNJ14Q9UNX9 436 aa8.91□□□□□ -0.98
NIF3L1-209ENST00000454952 TADA2AO75478 443 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 EFEMP2O95967 443 aa8.9□□□□□ -0.98
NIF3L1-209ENST00000454952 KRT2P35908 639 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms