RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HDAC7Q8WUI4 952 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 STAMQ92783 540 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 TNFRSF25Q93038 417 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 HSD17B14Q9BPX1 270 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 EIF2AQ9BY44 585 aaKnown RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 TRIM6Q9C030 488 aaPredicted RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 SMOC2Q9H3U7 446 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 MAN1C1Q9NR34 630 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 GJB4Q9NTQ9 266 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 IGSF9Q9P2J2 1179 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 PCDHA12Q9UN75 941 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 DUSP12Q9UNI6 340 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 GIT1Q9Y2X7 761 aa12.11□□□□□ -0.47
USP1-204ENST00000452143 PRG3Q9Y2Y8 225 aaPredicted RBP12.11□□□□□ -0.47
USP1-204ENST00000452143 C2CD2LO14523 706 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 TEX28O15482 410 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 NEMFO60524 1076 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 PAPLNO95428 1278 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 NBL1P41271 181 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 RARRES1P49788 294 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 SCNN1GP51170 649 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 DSG1Q02413 1049 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 CREMQ03060 361 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 NR5A1Q13285 461 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 CAPSQ13938 189 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 CALCRLQ16602 461 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 AMHR2Q16671 573 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 EARS2Q5JPH6 523 aaKnown RBP12.1□□□□□ -0.47
USP1-204ENST00000452143 ZFP42Q96MM3 310 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 GAD1Q99259 594 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 KCNK12Q9HB15 430 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 RXFP1Q9HBX9 757 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP1-204ENST00000452143 CHST7Q9NS84 486 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 CLUHO75153 1309 aa12.1□□□□□ -0.47
USP1-204ENST00000452143 FAM205CA6NFA0 338 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 ZBTB39O15060 712 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 ARF4P18085 180 aaPredicted RBP12.09□□□□□ -0.47
USP1-204ENST00000452143 AOC1P19801 751 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 ARL2P36404 184 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 GRIK3Q13003 919 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 KIAA0319Q5VV43 1072 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
USP1-204ENST00000452143 SLC27A1Q6PCB7 646 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 FEZF2Q8TBJ5 459 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 COLEC11Q9BWP8 271 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 NXF3Q9H4D5 531 aaKnown RBP12.09□□□□□ -0.47
USP1-204ENST00000452143 PLEKHA4Q9H4M7 779 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
USP1-204ENST00000452143 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
USP1-204ENST00000452143 HES2Q9Y543 173 aa12.09□□□□□ -0.47
USP1-204ENST00000452143 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 CCDC195A0A1B0GUA6 201 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 A0A1B0GUA9 196 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP1-204ENST00000452143 FDPSP14324 419 aaKnown RBP12.08□□□□□ -0.48
USP1-204ENST00000452143 GLRA2P23416 452 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 USP41Q3LFD5 358 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 FUT10Q6P4F1 479 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 FLCNQ8NFG4 579 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 NXPE3Q969Y0 559 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 RTP3Q9BQQ7 232 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 ZDHHC7Q9NXF8 308 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 FNIP2Q9P278 1114 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 EPS15L1Q9UBC2 864 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 DAXXQ9UER7 740 aaPredicted RBP12.08□□□□□ -0.48
USP1-204ENST00000452143 ADAM28Q9UKQ2 775 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 FBXL21Q9UKT6 434 aa12.08□□□□□ -0.48
USP1-204ENST00000452143 SF3B1O75533 1304 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP1-204ENST00000452143 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 N4BP1O75113 896 aaKnown RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 CDCA2Q69YH5 1023 aaPredicted RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 TAS1R1Q7RTX1 841 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 DIS3L2Q8IYB7 885 aaKnown RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 MCPH1Q8NEM0 835 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 SMG7Q92540 1137 aaKnown RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 MTMR9Q96QG7 549 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 APOL6Q9BWW8 343 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 POLR3FQ9H1D9 316 aaPredicted RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 PRMT7Q9NVM4 692 aaPredicted RBP12.07□□□□□ -0.48
USP1-204ENST00000452143 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
USP1-204ENST00000452143 VWA8A3KMH1 1905 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 F8W810 466 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 B4GALT5O43286 388 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 TGM5O43548 720 aa12.06□□□□□ -0.48
USP1-204ENST00000452143 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms